Protein

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UniProt accession
A0A8S5RY93 [UniProt]
Protein name
Pulmonary surfactant-associated protein D, c-type lectin, alpha-helical coiled
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSYTKKTWASKELITTNAMNNIETGIDDAHKDIASLNTEINKKLTKPIEDGTSGQVLSLGEDNNLIYKDMPKNGTDGKNATITEVTATVDNNTGTPEVEVSLGGTEEARTFSFSFKNLKGSKGDNGDKGDKGDKGDSGAKGQGVFTAKEALTPSGTTTADKINNGENIAQNDTIIDINGDVFTVTSISDSTINLSEKLFSLKTA
Physico‐chemical
properties
protein length:204 AA
molecular weight: 21576,43400 Da
isoelectric point:4,69873
aromaticity:0,04412
hydropathy:-0,64951

Domains

Domains [InterPro]
DC_1506
STR
1–102
DC_1506
A0A8S5RY93
1 204
Architecture
STR
STR 1-102 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctWdm1
[NCBI] 		2827883 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF43601.1 [NCBI]
Genbank nucleotide accession
BK032509 [NCBI]
CDS location
range 46855 -> 47469
strand +
CDS
ATGAGTTATACAAAAAAAACATGGGCAAGTAAAGAATTAATAACCACAAATGCAATGAATAATATTGAAACTGGTATTGATGATGCACATAAAGATATTGCAAGTTTAAATACTGAAATTAATAAAAAATTAACTAAACCAATAGAAGATGGAACATCAGGACAAGTTTTAAGTTTAGGAGAAGACAATAACTTAATATATAAAGATATGCCTAAAAATGGAACAGATGGTAAGAATGCAACAATAACAGAAGTTACTGCAACAGTTGATAATAATACAGGAACTCCAGAAGTAGAAGTAAGTTTAGGCGGTACAGAAGAAGCCAGAACGTTTAGTTTTTCTTTTAAAAATTTAAAAGGTAGCAAAGGCGATAATGGTGATAAAGGCGATAAAGGCGATAAAGGCGACAGTGGAGCCAAGGGTCAAGGAGTTTTTACAGCAAAAGAAGCATTAACACCTAGTGGAACTACTACTGCAGATAAAATTAACAATGGAGAAAACATTGCTCAAAATGATACTATTATAGATATTAACGGTGATGTTTTTACTGTAACATCTATTAGTGACTCCACAATAAATTTATCCGAAAAATTATTTAGTTTAAAAACCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
17a573c9200b688543e59cde7f870f78e1bbe23fa1e7d6360283be722912fd72
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7878
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50