Protein

View in Explore
Genbank accession
QIN97648.1 [GenBank]
Protein name
receptor-recognition protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKQIQFKRSKTAGQRPAASVLAEGELAINLKDRTLFTKDDSGNIIDLSISTGGNISGNITQTGDYTQTGKFNLIGPQIVASGGYIEFNYRTTGSGSWSGQHAAKAPIFVDLSSATSTSEYNPIIKQRFKDGTFSLGTLVSEGSLKFHYINEAGESKYWTFARSGNFQVDSGNLLVSGGYLVAQNNIETRTGSLIGPSVITKNISFDTKAFGQYDSQSLVQYVYPGTGEENGINYLRKVRAKSGGTIYHEIASAQTGKNDEISWWTGNTLTTKLMGLRNDGAMVLRRSLAIGTITTDENTNNYGSPTPMGERYIALGDAATGLKYIKQGVYDLVGNWNSVASITPDSFRSTRKALFGRSEDQGGTWIMPGTNAAFLSVQTQADENAAGDGQTHIGYNSGGKMNHYFRGKGKTNINTQKGMEVNPGILKLVTGSNNVMFYADGGITSVKQLSIYNGIYLAANNSTAGLTFAPTTTIDGTKQILWEGGTRAGQNKSYVTVKAWGNSFNASGDRNRETVFEVADGQGYYFYSQRVAPSGSETTGPVVTQFNGQVNARGSIITDGSFKVNGLSTLVGNVTMSNGLFVQGGSSITGQVKIGGTADALRIWNAEYGAIFRRSEASLHIIPTPKDAGESGGISNLRPLSISLNNGMVQMRHSVTLGDDGAGGNMITVDNDNKLVVVTSNSRISPNYRMQVGQAAYIDAECTDTVRPAGAGSFASQNNENVRAPFYMNINRTDTSTYVPILKQRYVQGDSCYSLGTLISTGDFRIHYHEGGDGTTGPQKADLAWQFRRDGSFRSPNKIEINTVTIGTDGNITGGTGNFANLNTTINNLKTDIVSSYPIGAPIPWPTDTPPEGYAIMEGQTFDKSAYPKLAMAYPSGVIPDMRGQTIKGKPSGRAVLSAEADGVKAHNHSASASNTDLGTKTTSSFDYGTKTSNTTGNHNHTVSGNTSSAGAHQHNEGTYFSSYGYFMNGYNTRQSSGAAIETSNRHGIAFYGKTSSAGAHTHSWSGTTSTTGNHAHTVGIGAHTHTVAIGSHGHTITVNSTGNTENTVKNIAFNYIVRLA
Physico‐chemical
properties
protein length:1064 AA
molecular weight: 113406,99450 Da
isoelectric point:8,86674
aromaticity:0,08741
hydropathy:-0,41955

Domains

Domains [InterPro]
DC_0538
STR
1–1063
DC_0538
IPR051934
Unmapped
740–1064
IPR051934
SSF88874
STR
831–969
SSF88874 SSF88874
IPR037053
ATT
838–891
IPR037053
IPR011083
ATT
843–890
IPR011083
QIN97648.1
1 1064
Architecture
STR
ATT
STR
STR 1-837 | ATT 838-891 | STR 892-1063 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN97648.1
1 1064
Domain Start End Length (AA) Confidence
N-terminal 1 775 775 0,0499
Central domain 776 974 200 0,1854
C-terminal 975 1064 89 0,9972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-775
Central
776-974
C-terminal
975-1064

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage PhiZZ23
[NCBI] 		2716727 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN97648.1 [NCBI]
Genbank nucleotide accession
MT176425 [NCBI]
CDS location
range 154672 -> 157866
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGTCAACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGACCGTACTCTTTTTACTAAAGATGACTCGGGAAATATCATTGATTTGAGCATTTCTACTGGCGGTAATATCAGTGGTAATATCACTCAAACTGGGGATTATACACAGACTGGAAAATTTAATTTAATTGGTCCGCAAATTGTAGCAAGCGGTGGATATATTGAGTTTAATTATCGTACGACTGGAAGCGGCTCGTGGTCTGGTCAACACGCTGCAAAAGCTCCAATTTTTGTAGATTTGAGCTCCGCTACTTCTACATCTGAATATAATCCTATAATTAAACAACGCTTTAAAGATGGAACTTTTTCATTAGGTACTTTAGTTTCTGAAGGTTCATTAAAATTCCATTACATTAATGAGGCAGGTGAATCTAAATATTGGACATTTGCGCGCTCAGGTAATTTTCAAGTTGATTCTGGTAATTTATTAGTATCTGGTGGGTATTTAGTCGCTCAGAATAATATTGAAACAAGAACAGGTTCTTTGATTGGTCCATCTGTTATAACTAAAAATATTTCATTTGATACAAAAGCATTTGGACAATACGATTCGCAGTCATTAGTTCAATATGTTTATCCTGGAACAGGTGAAGAAAATGGTATAAACTATCTTCGTAAAGTTCGAGCTAAATCAGGTGGAACTATTTACCATGAAATCGCTTCAGCTCAAACTGGTAAGAATGATGAAATTTCTTGGTGGACCGGAAATACACTTACTACTAAATTAATGGGTCTTCGTAATGATGGCGCAATGGTATTACGTCGTTCACTTGCTATTGGCACAATTACCACTGATGAAAATACTAACAACTACGGTTCTCCTACTCCAATGGGAGAAAGATATATTGCTTTGGGCGATGCTGCAACCGGTTTAAAATACATTAAGCAGGGTGTTTATGATTTAGTAGGTAATTGGAATTCTGTTGCTTCTATTACTCCTGACAGTTTCCGTAGTACTCGTAAAGCGTTATTTGGTCGTTCAGAAGACCAAGGTGGAACATGGATTATGCCTGGAACGAACGCTGCCTTTTTATCAGTCCAAACACAGGCTGATGAAAACGCTGCTGGAGACGGTCAAACCCATATTGGATATAACTCTGGCGGTAAAATGAACCACTATTTCCGTGGTAAAGGAAAAACTAATATTAATACTCAAAAAGGCATGGAAGTTAACCCGGGTATTTTGAAATTGGTAACTGGCTCTAATAATGTAATGTTTTATGCTGATGGCGGTATTACATCTGTTAAGCAGCTTTCAATATATAACGGCATATATTTAGCAGCTAATAATTCTACTGCTGGGCTAACATTCGCTCCAACTACTACAATTGATGGCACTAAGCAAATTTTGTGGGAAGGCGGTACTCGTGCTGGTCAGAATAAAAGCTATGTAACTGTTAAAGCATGGGGTAATTCATTTAACGCATCTGGCGATCGTAATCGTGAAACGGTTTTTGAAGTAGCTGATGGACAAGGATATTATTTTTATTCACAGCGTGTGGCTCCAAGTGGCTCTGAAACTACTGGGCCTGTTGTAACCCAGTTCAATGGACAAGTTAATGCTAGAGGAAGTATTATTACTGACGGAAGTTTTAAAGTTAATGGATTAAGCACTTTAGTCGGTAATGTTACCATGTCTAATGGTTTGTTTGTCCAAGGTGGTTCTTCTATTACTGGACAAGTTAAAATTGGCGGAACAGCTGATGCATTAAGAATTTGGAATGCTGAATACGGTGCTATTTTCCGCCGTTCAGAAGCGTCATTACATATTATCCCTACTCCTAAAGATGCCGGTGAAAGCGGTGGAATAAGTAATCTCCGCCCACTTAGTATTAGCCTTAATAATGGTATGGTGCAAATGCGTCATTCCGTTACATTAGGCGATGATGGCGCTGGCGGCAATATGATTACTGTGGATAACGACAATAAACTTGTCGTTGTTACTAGTAATAGTCGCATTTCTCCTAATTACCGTATGCAGGTAGGACAAGCAGCTTATATTGATGCTGAATGTACTGACACAGTTCGCCCGGCTGGTGCAGGGTCTTTTGCTTCACAAAATAATGAAAACGTTCGTGCTCCATTCTATATGAATATTAATCGTACAGATACAAGTACTTACGTTCCTATTTTGAAACAACGATACGTCCAGGGCGATAGTTGTTATTCTTTAGGTACATTAATTAGTACGGGTGATTTTAGAATTCACTATCATGAAGGCGGCGATGGAACAACAGGCCCACAAAAGGCGGATTTAGCATGGCAATTTAGACGTGATGGCTCGTTCCGTTCACCTAATAAAATTGAAATTAATACCGTTACAATTGGTACTGACGGTAACATCACTGGTGGTACTGGTAACTTTGCTAACTTGAACACGACAATAAATAATCTTAAGACGGATATCGTCTCAAGTTATCCAATTGGTGCTCCGATTCCTTGGCCGACTGATACGCCTCCTGAAGGTTATGCTATCATGGAAGGCCAGACTTTTGATAAGTCTGCATACCCAAAATTGGCTATGGCTTACCCATCTGGCGTAATTCCAGATATGCGCGGGCAAACTATTAAAGGTAAACCAAGTGGTCGAGCTGTATTAAGCGCAGAAGCCGATGGTGTTAAGGCTCATAACCATAGTGCTTCAGCATCTAATACTGATTTAGGTACTAAAACCACATCAAGCTTTGATTATGGTACTAAGACTAGTAACACCACAGGAAACCATAACCATACAGTGAGTGGTAATACTAGTTCCGCCGGTGCGCACCAACACAACGAAGGGACGTATTTTTCATCGTACGGATACTTTATGAACGGATACAATACTCGCCAGTCATCGGGAGCTGCCATCGAAACATCCAATAGACACGGCATAGCGTTTTATGGTAAAACCTCTAGTGCTGGTGCCCACACTCATAGTTGGTCAGGAACCACGAGTACTACAGGTAACCATGCTCATACTGTAGGTATAGGTGCTCATACCCACACGGTAGCAATTGGCTCACATGGTCATACTATCACTGTAAATAGTACAGGTAATACAGAAAACACGGTTAAAAACATTGCTTTTAACTATATCGTTCGTTTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2baaeab4bd7997279422b980604625dfc580b4215567ac4d6905541b71ccf917
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2765
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage host range evolution through engineered enrichment bias, exploiting heterologous surface receptor expression Zeng,Z. and Salmond,G. 2020 32776385 GenBank