Protein

View in Explore

Genbank accession

YP_010646147.1 [GenBank]

Protein name

tail fiber protein and host specificity

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,73

Protein sequence

MQIWIHDKSMRKVCALNNEIPGMLPYTNSQWHSYLEYSTSTFDFTIPKIVNGKLHDDLKYINDQMYVSFYYDNSYHVFYVSQLVENDFSFQVTCNNTNLELAREVARPLADSGGAKSVEWYLRNLELLGFAGLEIGVNEISDRTRTLTFESQSGTKLEQLHSLMNQFDAEFVFRTDLNRDGTLKKFVIDIYQRPDENHHGIGKARGDVVLYYQSGLKGVQVTSDKTQLFNAGVFTGADGVNLDSVEFEEKNELGQVEFYSRKGTSFVFAPLSREHYPSTMNPDSADNWTRKDFQTEYKDVESLKAYALRTIKQYAYPLLTYTVDVQSSFLDNYKDINLGDTIKIVDNNFRGGLALEARVSEMIISFDNPTNNSVVFTNFRKLDNKPSIELQQRIDEIVSKSLPYHVEIRTTNGTVFKNGIGHSTVKPILKQGDKIVNATYRFVIDGTIKYSGMTYDMVASEINQPTTLTISAWVDNKEVASEEVTFVNVSDGKQGPKGDRGNDGLPGKDGVGLKSTTITYGMSDSDTIMPTSWTANPPTLIKGKYLWTKTQWTYTDSTSETGYQKTYIAKDGNNGNDGLPGKDGVGIRNTTITYAQGTSGTVAPTNGWSTQVPNVPAGQYLWTKTVWDYTDNTSETGYSVAKMGEQGPKGDRGERGLQGPRGDQGIPGPKGIDGTDAPTIFVKSYTYSAGSKAYIKLTGPNAFEQTLYYSRGHNVWVLDATTHKLKEFVHCDTYITMSFNHNGVNITLADYLNSITDSIVAIAAADADAVDQNFRDVLNKMGGNPELGTWSGRRTGHVFIGMSKRSDGTWPLQPRQGYEVAIQEDGSAPEIGCTLSIGGIVANGADGKTQYTHIAYANSADGSKDFSTSDSNRAYIGMYVDFNINDSTNPSDYSWTLIKGADGTQGVPGKPGADGKTPYFHTAWAYSADGTDGFTTVYPNLNLLEGTATFDGMNPNSSDNSVSAITKTKISGIANTVMDVKTSGNAFAVGFYTQKGYNITAGQTITISFIAKASSDTSLLVGFEHFPSGHKTFTISTKWELYTYTFTATTSGTPTFVMYGWDMVAGQGFQLYNPKAELGSVATPWMPSESEVTTADYPSFIGHYTNYTQVDSPNPRDYTWILIRGNDGKQGPQGPRGEQGIPGPKGADGKTQYTHIAYADTISGSGFSQTDVNKAYIGMYQDFNAEDSKNPQDYRWSKWKGSDGKDGIPGKAGADGRTPYVHFAYADSADGQTGFSLTQTGSKRYLGVLTNFIKEDSTNPSDYTWNDTAGSVSVGGENLIINSAFPKNFDGWGFWDASTPNNNLHIATHGFYYNGTKPLFRLDNNTNGVVPASTKRFPVKRNTDYSLNIQIFATGNLKSVDIYFLGRKANETDKELTKVIHLKTHTGSPSTTQTVKWHLTFNSGDCDEGFIRIINNGTTDGNTSMLFFAEVDCYEETTDRAWQASSKDLEEEIDTKADDVLTQAQLNRLNETNSIIKAELNAKASLDILNQWVEAYQNFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMTASNEGLVVGKTDNSSSMLFSPNGRISMFSAGNEVMYISQGVIHIENGIFSKTIQIGRYREEQDFLNPDRNVIRYVGGA

Physico‐chemical properties

protein length:	1621 AA
molecular weight:	178978,86050 Da
isoelectric point:	5,18664
aromaticity:	0,11043
hydropathy:	-0,52529

Domains

Domains [InterPro]

DC_0002
STR
1–606

DC_0002 G3DSA:1.20.5.320 IPR039477 DC_1971 G3DSA:1.20.5.320 DC_0002

IPR010572
ENZ
142–381

IPR010572 PTHR24637 Coil

DC_1328
STR
570–901

DC_1328 G3DSA:2.60.120.260

IPR008979
STR
955–1055

IPR008979

DC_1328
STR
1034–1202

DC_1328

YP_010646147.1

1 1621

Architecture

STR

STR 1-1621

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0002	STR	DC_0002	1	606	Novel HMM	DC_0002	Central	Low	Positional only	166 proteins / 166 hits
IPR010572	ENZ	DC_0675	142	381	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
PTHR24637	Unmapped	-	492	1217	PANTHER	COLLAGEN	-	-	-	-
DC_1328	STR	DC_1328	570	901	Novel HMM	DC_1328	Central	Low	Positional only	136 proteins / 136 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	644	698	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
IPR039477	STR	DC_0384	711	801	InterPro cluster	ILEI/PANDER domain	Central	Low	Positional only	49 proteins / 49 hits
DC_1971	STR	DC_1971	901	1076	Novel HMM	DC_1971	Central	Low	Positional only	95 proteins / 95 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	946	1066	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008979	STR	IPR008979	955	1055	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
DC_1328	STR	DC_1328	1034	1202	Novel HMM	DC_1328	Central	Low	Positional only	136 proteins / 136 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	1123	1174	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_0002	STR	DC_0002	1199	1621	Novel HMM	DC_0002	Central	Low	Positional only	166 proteins / 166 hits
Coil	Unmapped	-	1500	1534	Coils	Coil	-	-	-	-

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptococcus phage CHPC927 [NCBI]	2365048	No lineage information
Host	Streptococcus thermophilus [NCBI]	1308	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Genbank protein accession

YP_010646147.1 [NCBI]

Genbank nucleotide accession

NC_070679.1 [NCBI]

CDS location

range 14815 -> 19680
strand +

CDS

ATGCAAATTTGGATTCATGATAAAAGCATGCGCAAAGTGTGCGCATTGAATAATGAAATTCCCGGAATGTTGCCATATACGAACAGTCAATGGCATTCATATCTTGAATACTCAACAAGTACGTTTGACTTCACAATTCCTAAAATTGTAAATGGCAAGCTACACGATGATTTAAAATACATCAACGACCAAATGTATGTGTCGTTTTATTATGATAATTCCTACCACGTTTTCTATGTATCGCAACTCGTTGAAAATGATTTTAGTTTTCAAGTGACTTGTAATAACACCAACCTTGAATTGGCAAGGGAAGTTGCACGACCACTTGCAGATAGTGGCGGTGCCAAAAGTGTTGAGTGGTATCTTCGGAATCTTGAATTGCTTGGTTTTGCAGGACTTGAAATAGGTGTCAATGAAATTTCTGATAGAACAAGAACGCTTACTTTTGAATCACAAAGTGGCACAAAGCTAGAGCAACTTCATAGCTTGATGAATCAATTTGATGCAGAGTTTGTTTTTCGTACAGATTTAAACCGAGATGGTACTTTAAAAAAATTTGTCATTGACATTTACCAACGACCAGATGAAAACCATCACGGTATAGGTAAGGCAAGAGGAGATGTTGTTCTCTACTACCAAAGCGGATTGAAAGGCGTTCAAGTCACTAGTGATAAGACACAACTATTCAACGCTGGTGTTTTCACTGGTGCAGACGGTGTTAATCTTGATAGCGTTGAGTTTGAAGAAAAAAACGAGTTAGGACAGGTAGAGTTCTATTCACGAAAAGGCACTAGCTTTGTTTTTGCTCCACTTTCAAGAGAGCACTACCCATCTACCATGAATCCAGACAGCGCTGATAACTGGACACGTAAGGATTTTCAAACAGAATACAAGGACGTTGAATCCTTAAAAGCTTACGCCTTACGTACTATCAAGCAGTATGCTTATCCACTATTGACTTACACAGTAGATGTTCAGTCTAGCTTTCTGGATAACTATAAAGACATCAATCTAGGTGATACCATCAAGATTGTGGATAACAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCTACAAACAATTCGGTCGTTTTTACTAATTTCAGAAAGTTAGATAATAAACCGTCTATCGAATTGCAACAACGTATCGACGAGATTGTTTCTAAATCATTGCCATATCATGTTGAGATAAGGACCACAAACGGTACAGTATTTAAGAATGGTATTGGTCACTCTACTGTTAAACCAATTTTAAAGCAAGGCGATAAAATTGTTAATGCAACATATCGCTTTGTGATTGACGGTACTATTAAATACTCAGGTATGACCTATGATATGGTAGCATCAGAGATTAACCAACCAACCACGCTTACTATCTCAGCGTGGGTAGATAACAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGATGGTAAACAAGGACCTAAGGGCGATAGAGGTAATGACGGCTTACCGGGTAAAGACGGGGTAGGCTTGAAATCTACCACAATCACTTACGGCATGTCTGACAGTGATACTATCATGCCTACGAGTTGGACTGCAAACCCACCAACTTTGATTAAAGGGAAATACCTATGGACTAAAACTCAGTGGACGTATACTGATAGTACAAGTGAGACTGGTTATCAAAAGACTTATATTGCTAAAGATGGTAATAACGGTAATGATGGCCTTCCGGGTAAAGATGGCGTTGGTATACGTAATACCACAATCACTTACGCACAAGGAACATCTGGAACAGTAGCACCAACGAATGGTTGGAGTACTCAAGTGCCGAATGTACCTGCTGGACAATACCTATGGACTAAAACAGTCTGGGATTATACTGACAACACTAGTGAAACTGGATATTCAGTCGCTAAAATGGGCGAGCAAGGTCCAAAAGGCGACCGTGGCGAGCGAGGTTTGCAAGGTCCAAGAGGTGACCAAGGTATACCTGGTCCTAAAGGTATTGATGGTACTGATGCTCCAACGATTTTCGTTAAGTCCTATACATACTCAGCAGGTTCAAAGGCCTATATTAAACTGACTGGGCCAAATGCTTTTGAGCAAACCTTATATTACAGCCGAGGACACAATGTGTGGGTTCTTGATGCTACAACACATAAACTCAAAGAGTTCGTACATTGTGATACCTATATAACCATGTCATTTAATCATAATGGTGTTAATATAACATTGGCTGACTACCTAAATAGTATTACAGATAGTATTGTCGCAATTGCAGCAGCGGATGCAGACGCAGTTGACCAAAATTTTAGGGATGTGCTTAACAAAATGGGTGGTAATCCAGAACTTGGAACATGGAGTGGGCGAAGAACTGGTCACGTCTTTATAGGCATGTCCAAGCGGTCTGATGGAACCTGGCCACTGCAACCACGACAGGGGTATGAAGTAGCCATACAAGAAGATGGATCAGCACCAGAAATTGGATGCACTCTGTCAATAGGAGGAATAGTTGCTAATGGAGCAGACGGTAAAACACAATATACCCATATTGCATACGCGAATAGCGCAGATGGAAGTAAAGATTTTTCAACTTCTGATTCTAATCGTGCCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACCAATCCGAGCGATTACTCATGGACACTTATTAAAGGTGCTGACGGTACTCAAGGTGTACCAGGAAAACCCGGGGCTGACGGGAAGACTCCTTATTTCCATACGGCGTGGGCTTACAGTGCAGATGGTACCGATGGTTTCACGACTGTTTACCCTAATTTGAATTTGTTGGAAGGGACCGCTACGTTTGACGGAATGAACCCTAACTCTAGTGATAATTCGGTTAGTGCTATTACAAAAACTAAAATATCAGGAATTGCTAATACAGTCATGGACGTAAAAACAAGCGGAAATGCTTTTGCCGTTGGTTTTTATACACAAAAAGGTTATAACATAACCGCTGGGCAGACCATTACTATTTCATTTATAGCAAAAGCATCAAGTGACACAAGTCTTTTGGTTGGATTTGAACATTTTCCAAGTGGACATAAAACGTTCACAATAAGCACAAAGTGGGAACTTTATACTTATACATTCACAGCAACAACGTCAGGAACTCCAACTTTTGTGATGTACGGGTGGGATATGGTAGCAGGGCAAGGATTCCAATTATACAACCCTAAAGCGGAACTAGGTTCAGTTGCTACCCCTTGGATGCCAAGTGAAAGCGAAGTCACAACTGCTGACTATCCAAGTTTCATCGGACACTACACAAACTATACACAAGTAGATAGTCCTAATCCTCGAGATTACACTTGGATTCTCATTCGAGGTAACGATGGGAAACAAGGACCACAAGGACCTCGAGGTGAGCAAGGAATACCTGGTCCTAAAGGTGCAGACGGAAAAACACAGTATACCCACATAGCTTATGCTGATACAATTTCAGGTAGTGGCTTTAGTCAAACAGATGTCAATAAAGCCTATATTGGTATGTATCAAGACTTCAATGCCGAAGATAGCAAAAATCCACAAGATTATCGTTGGTCTAAGTGGAAAGGTAGTGATGGTAAAGATGGGATTCCAGGAAAAGCTGGGGCTGACGGACGTACGCCTTACGTCCATTTTGCTTATGCCGATAGTGCCGATGGTCAAACTGGGTTCAGTTTGACACAGACTGGAAGTAAACGCTATTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGCACTAATCCATCGGACTATACGTGGAATGACACTGCTGGAAGTGTTTCAGTTGGTGGAGAGAATCTAATCATTAACTCGGCTTTCCCAAAGAATTTTGATGGATGGGGTTTTTGGGACGCAAGTACACCTAATAACAATCTTCATATAGCTACACATGGATTTTACTATAACGGAACAAAACCCCTTTTTAGATTAGACAATAACACCAATGGTGTGGTTCCTGCATCAACAAAACGTTTTCCAGTCAAACGCAACACTGATTATTCTCTAAATATTCAGATATTTGCAACCGGAAACCTCAAGAGCGTTGATATCTATTTTCTTGGCAGGAAGGCGAATGAAACTGACAAGGAATTGACTAAAGTGATCCATTTAAAAACACATACAGGTTCACCATCAACCACACAGACGGTTAAATGGCATCTAACATTTAACTCTGGAGATTGCGACGAAGGGTTCATTCGTATTATTAACAATGGCACTACTGACGGTAACACTTCTATGCTATTTTTTGCAGAAGTAGACTGCTATGAGGAAACCACTGACCGAGCGTGGCAAGCGTCGTCGAAAGATTTGGAAGAGGAAATAGACACCAAAGCCGATGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAAGCTGAATTAAACGCTAAAGCATCACTTGATATACTCAATCAGTGGGTGGAAGCCTATCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTCATCGATAGCTACATGACTGCATCAAACGAGGGTCTTGTTGTTGGTAAAACTGATAATTCTAGTTCTATGTTGTTTAGTCCAAACGGGCGCATCTCAATGTTTTCTGCGGGTAATGAGGTAATGTATATCTCGCAAGGTGTCATCCATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTTTTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Tertiary structure

PDB ID

8d81ebafa3e6494a4868ca292523e21d411ca93c9b12294fd2f1915f487dcbd5

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7645

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus	Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T.	2019-05-29	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature