Protein

View in Explore
Genbank accession
QBX23882.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MSKEVASARIQHRGMSTQEWESSSDVLMEREIGIDTTTGYPKVGDGKRRFSELNDLRGPMGPQGSTGERGPIGPTGPIGKTGDTGPQGPPGPTGETGPKGDAGAKVTSGKLAEGQLTLKLDDGSEAVVEGDFRGPQGPTGPQGPKGADGKMTFEQLTEEQRKQLKGDKGDPGQRGADGQRGEAGPPGPKGDNGAPGPMGPRGERGPAGDPASLPHDVLRLRDLSSYVRLADIQYQLNNIGKLKDETTSQYLSVRVVDNGQVPYNTTGMIVFERAGGK
Physico‐chemical
properties
protein length:277 AA
molecular weight: 28926,67020 Da
isoelectric point:5,62509
aromaticity:0,03610
hydropathy:-0,91516

Domains

Domains [InterPro]
SSF69349
STR
8–157
SSF69349 IPR008160
IPR041352
ATT
10–47
IPR041352 IPR050149
IPR008160
STR
58–109
IPR008160 SSF69349
G3DSA:1.20.5.320
STR
76–127
G3DSA:1.20.5.320 G3DSA:1.20.5.320
QBX23882.1
1 277
Architecture
ATT
STR
ATT 8-47 | STR 48-274 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan166
[NCBI] 		2548017 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus dysgalactiae
[NCBI] 		1334 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23882.1 [NCBI]
Genbank nucleotide accession
MK448858.1 [NCBI]
CDS location
range 37470 -> 38303
strand +
CDS
ATGTCAAAAGAAGTTGCATCAGCAAGGATACAGCATAGAGGCATGTCCACGCAAGAGTGGGAATCAAGCTCAGATGTCTTAATGGAGCGAGAAATTGGAATTGACACGACTACGGGTTACCCCAAAGTTGGCGATGGTAAACGCCGATTTAGTGAGCTAAACGACTTGCGTGGTCCTATGGGACCTCAAGGTTCTACAGGAGAAAGAGGCCCAATTGGTCCAACGGGTCCGATTGGCAAGACTGGCGATACAGGTCCGCAGGGTCCGCCCGGCCCCACAGGAGAGACAGGGCCTAAAGGTGACGCTGGCGCTAAAGTAACTAGTGGCAAGCTAGCAGAGGGACAATTAACCCTTAAGTTAGATGATGGCTCAGAGGCTGTTGTCGAGGGCGATTTTAGAGGTCCTCAAGGACCGACCGGGCCACAAGGTCCTAAAGGTGCTGACGGTAAAATGACCTTTGAACAGCTCACGGAAGAGCAGCGGAAGCAACTAAAAGGTGATAAAGGGGACCCTGGTCAAAGAGGAGCAGATGGTCAGCGAGGGGAAGCGGGTCCTCCTGGTCCTAAGGGTGATAATGGTGCGCCTGGTCCAATGGGTCCAAGAGGTGAACGGGGACCAGCGGGAGATCCAGCATCTTTACCGCATGATGTTTTAAGGCTAAGAGATTTGTCTAGCTATGTTAGATTAGCTGATATCCAGTATCAGTTAAACAACATTGGCAAGCTAAAAGATGAGACAACCAGTCAGTATCTATCTGTCCGTGTTGTTGATAACGGCCAAGTGCCTTATAACACCACTGGCATGATTGTTTTTGAGAGGGCTGGGGGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b9721e4519559caebfb04d6f24293858bc029dd992b80032b1f87422b0a7589e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7554
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank