Protein

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Genbank accession
YP_010661394.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MALYVKQSGVWTPVPTLKTKNSGSWAQVQVGFVKVSGVWKQFYVPEVLVTITSNTLNVNLQSLFTSGVWSSSAVAKRVVINPGVIIGSSVPATAALRTGTGWGGTLTLENKGEIQGAGGVANSSAGGHAILCEAAGMIIRNTGAIRGGGGGGGKGGNGGAGYYYSTATEGPVYAYPGSPRYQWTSQNGTNINSAYWAGASIFGTKSNSNPYTLGAYTYYRGTQQAVDGCDSNGFYCIQHYSIYRQYQQTNNTSGGAGGNGGRGQGYGQTNASGSGGSAGGTNAGAGGTGGTGANFGAAGATGNSGANGNNGSGTAGTAGGAAGKAISGSSSLTNTGTIQGATS
Physico‐chemical
properties
protein length:343 AA
molecular weight: 33871,52190 Da
isoelectric point:9,57177
aromaticity:0,09038
hydropathy:-0,24286

Domains

Domains [InterPro]
DC_1762
ATT
1–160
DC_1762 DC_0422
IPR007932
RBD
47–183
IPR007932
YP_010661394.1
1 343
Architecture
ATT
RBD
RBD
ATT 1-160 | RBD 161-183 | RBD 187-343
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N34
[NCBI] 		2509586 Uroviricota > Caudoviricetes > Pootjesviridae > Trinifflemingvirus > Trinifflemingvirus N34
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010661394.1 [NCBI]
Genbank nucleotide accession
NC_070884.1 [NCBI]
CDS location
range 5098 -> 6129
strand -
CDS
ATGGCACTCTACGTTAAACAGTCAGGCGTCTGGACTCCTGTTCCTACGCTAAAGACGAAGAACTCAGGTAGCTGGGCTCAGGTTCAAGTAGGTTTCGTTAAAGTAAGCGGCGTCTGGAAACAGTTCTACGTTCCAGAAGTTCTGGTAACGATCACTTCAAACACTCTGAACGTCAATCTCCAGAGTCTCTTTACGAGCGGAGTTTGGTCAAGCTCTGCTGTCGCAAAACGAGTCGTCATCAATCCTGGCGTCATCATCGGCAGCTCAGTTCCTGCTACAGCAGCTCTTCGCACCGGCACGGGCTGGGGTGGCACTCTCACTCTCGAGAACAAAGGCGAAATTCAGGGTGCTGGTGGCGTAGCCAACTCTAGCGCAGGCGGTCATGCTATTCTCTGTGAAGCAGCAGGAATGATCATCAGGAACACCGGTGCTATCCGGGGTGGCGGAGGTGGCGGAGGCAAAGGCGGTAACGGCGGCGCTGGCTACTACTATTCCACTGCTACTGAAGGTCCGGTGTACGCTTATCCTGGATCTCCTCGCTATCAATGGACTTCTCAGAACGGCACCAACATAAACTCCGCCTATTGGGCAGGTGCTAGCATTTTCGGAACGAAAAGCAACTCGAATCCTTATACGTTAGGCGCGTATACTTACTATCGAGGAACACAACAGGCTGTCGACGGCTGCGACTCGAACGGATTTTACTGTATACAGCATTATTCCATCTACAGACAGTACCAACAGACGAACAATACTTCTGGTGGTGCTGGCGGTAACGGCGGTAGAGGTCAGGGTTACGGCCAGACGAACGCTTCTGGTTCAGGTGGTAGTGCTGGTGGTACGAACGCAGGTGCTGGTGGCACAGGTGGTACTGGAGCCAACTTCGGAGCTGCAGGAGCCACAGGCAACTCAGGTGCGAACGGTAACAACGGCTCTGGTACTGCAGGTACGGCTGGTGGTGCAGCTGGTAAGGCTATCTCTGGATCGAGCTCGTTGACAAATACCGGTACGATCCAAGGTGCTACTTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c959310d5a95c7ce2944c31b902b07c4a847f924bb1225b399408a3716bb15e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7122
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank