Protein

UniProt accession
J9PVK6 [UniProt]
Protein name
Pectin lyase domain containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,93
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MYVPGDTYNVSKTIVVPRGVQLVFAPNAIIKPQNNINIFQMKPLASVEGATIDLKSFPSYDKACFYFNAADIFQFYEQSHVLKDINIMGVQKSSGWLGTGILMEANTPDSYIDNVKCNNITMTNIGKGIHLRVDPSITDNNHPSWVNANQFHQITIMNFDYGIYLEGHNSIPRDVGGNLFSQLQLQAEAGSKRMIYCESALNHFDGFFWDLHKMQVTNPAFEFTKTSKFNEVKSAMAQELTESWVDDGYLNSFPSPNNYVSDKRINAFPVSIPYTPNFLGNQDDWMVNGDKRGFTITQTSTHPIISGELTDLLSFDTEAGVTFNMSNVTYENPVVLEIDLSTDPCWYASFLTAVSPWGFQPKGYELDMFDIVSNKWMGGVHWTKNNKSQSHAVSAPWAGADKCTKVRIKFWGNNKVDDPKKPSPIPVATISRIMMTSTKDGGRAYMPYAATPTLPPPDITPILPADKTMVGDQDDILVQADKRYTVTSIGAAKTGGNIFGMFSLRKEQFCRWTNPTLAAPIIIEIDFGAKPIPYMESVGIAFGQGETPTNVKIERVTASGGSYVQLTNQAGLKTPSLHVASRAAQTYKLKFTIWGANNINTLVRVNRIFGTTGDGYPVAFVNTESDNTVYGDLSFGDTAKGIVLRSPDGSNWKMSIGNDGVQKWTKI
Physico‐chemical
properties
protein length:667 AA
molecular weight: 73851,76970 Da
isoelectric point:6,03576
aromaticity:0,10945
hydropathy:-0,26942

Domains

Domains [InterPro]
IPR012334
1–169
IPR012334
IPR011050
2–173
IPR011050
J9PVK6
1 667
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage B4
[NCBI] 		1141133 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus cereus
[NCBI] 		1396 Bacteria > Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0016829 lyase activity Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3ebe9480f56189d832466796dffe67e1cebe22aa4d7759d4d8038dfac1f30f6e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7242
Evidence 0,7242
Download PDB

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of a virulent bacteriophage B4 infecting food-borne pathogenic Bacillus cereus. Lee JH, Shin H, Son B, Heu S, Ryu S 2013-10 23649177 PubMed
Characterization and complete genome sequence of a virulent bacteriophage B4 infecting food-borne pathogenic Bacillus cereus Ju-Hoon Lee, Hakdong Shin, Bokyung Son, Sunggi Heu, Sangryeol Ryu 2013-05-07 10.1007/s00705-013-1719-2 DOI