Protein

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Genbank accession
GENB_76d5948f32b7 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA
Physico‐chemical
properties
protein length:681 AA
molecular weight: 73664,86410 Da
isoelectric point:5,52972
aromaticity:0,08957
hydropathy:-0,12834

Domains

Domains [InterPro]
DC_0058
STR
1–679
DC_0058
IPR013783
STR
194–257
IPR013783
GENB_76d5948f32b7
1 681
Architecture
STR
STR 1-679 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_76d5948f32b7
1 681
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9945
Central domain 156 363 209 0,0939
C-terminal 364 681 317 0,1574
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-363
C-terminal
364-681

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage BIP-1
[NCBI] 		263375 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AY526909.1_CDS_[complement(15217..17262)] [NCBI]
Genbank nucleotide accession
AY526909.1 [NCBI]
CDS location
range 15217 -> 17262
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
9ce450cdb0280486976658dd040d5492439b0ac109297085d40937bd9471a63d

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,9446
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50