Protein

View in Explore
Genbank accession
XRX03534.1 [GenBank]
Protein name
tail length tape measure protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MADSVVIREFLVALGFKVDEKGLKNFKEGVEGTTKGVKQLIATVSGAALTVSAGVAAFASKLERLYFVSQRTGASAANLRGFEFAARNMGVSAEAATGTIENLARFLRNNPAGEGYLTTLGVQTRNANGELRDTVDIMSDLGKSLANKPTWLASQYGNILGIDENLMLAMRNGDFEKLLAQYREMSKSTGLDKAADDSHRFMTQLRGLGTSFENLGIRVEGAMLQKVGPSLDRFQRWMDDHGDEIANRIADIASAILKVAEAAGPPLAKLVDRFIELDRATDGWSTKILLLGVALKALGVFKIAGGIWKIVGALRAGGAAASGATGLLSAVGVELAALASSAAAVGAAFLGWKIGDGVRDQIDGLITKLSGGRFRSLWDILTLKDRRGLDATGGYTQEEIDSVKDGGGAKLTPPRVEQSRTPATSLAAPEPTLTQGGAKPLAPVPQPSGTRNPIPQLVPAPILAPRIERVSAPDDSGLAGRLSQLADTAFGKLIARGEGDYNSVNRGARGGYRAGTENLEGMTLAQVMAAQRAGQFNAAGRYQIIGSTLAEAARGLKLSGSEMFDRKLQDRIFEQYLVRNKRRAIADYVEGRSDDLRGALRASSREWASVADPDTGRSYYAGKGNNRASITAAEMETALRNTRATYQPAGALAAQSAARGGPAKVELHQSTQIHVTGSGDPSAAGRAVEREQRAVNSDMVRNMQGVIA
Physico‐chemical
properties
protein length:708 AA
molecular weight: 74841,91950 Da
isoelectric point:9,45972
aromaticity:0,05650
hydropathy:-0,20212

Domains

Domains [InterPro]
DC_0145
STR
1–706
DC_0145
G3DSA:1.10.530.10
RBD
486–632
G3DSA:1.10.530.10
IPR023346
STR
489–616
IPR023346
XRX03534.1
1 708
Architecture
STR
STR 1-706 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_E192a
[NCBI] 		3417002 No lineage information
Host Burkholderia sp.
[NCBI] 		36773 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX03534.1 [NCBI]
Genbank nucleotide accession
PQ789819 [NCBI]
CDS location
range 13878 -> 16004
strand +
CDS
ATGGCTGATTCGGTCGTCATCCGCGAGTTCCTGGTCGCGCTCGGCTTCAAGGTCGACGAGAAGGGCCTGAAGAACTTCAAGGAAGGCGTCGAAGGCACGACGAAGGGCGTCAAGCAGCTGATCGCGACGGTTTCCGGCGCCGCGCTCACCGTGAGCGCCGGCGTCGCGGCGTTCGCGTCGAAGCTCGAGCGCCTGTACTTCGTCTCGCAGCGCACCGGCGCGTCGGCGGCCAACCTGCGCGGCTTCGAGTTTGCCGCGCGGAACATGGGCGTCTCGGCCGAGGCGGCAACCGGCACGATCGAGAATCTCGCGCGCTTCCTGCGCAACAACCCGGCCGGCGAGGGCTACCTCACGACGCTGGGCGTGCAGACGCGGAACGCGAATGGCGAGCTGCGCGACACGGTCGACATCATGTCCGACCTCGGGAAGTCGCTGGCGAACAAGCCGACGTGGCTCGCGAGCCAGTACGGCAACATCCTCGGCATCGACGAGAACCTGATGCTCGCGATGCGTAACGGGGACTTCGAGAAGCTACTCGCGCAGTACCGCGAGATGTCGAAGTCGACCGGTCTGGACAAGGCGGCCGACGATTCGCACCGCTTCATGACGCAGTTGCGTGGACTCGGCACGTCGTTCGAGAACCTCGGCATCCGCGTCGAGGGCGCGATGCTGCAGAAGGTCGGGCCAAGCCTCGATCGGTTTCAGCGTTGGATGGACGACCACGGTGACGAGATCGCCAACAGGATCGCCGACATCGCGAGTGCCATCCTGAAAGTGGCCGAGGCCGCGGGGCCGCCGCTTGCGAAGCTGGTAGATCGGTTTATCGAGCTCGACCGGGCGACGGACGGTTGGTCGACGAAGATTCTGCTGCTCGGTGTCGCGCTGAAGGCGCTGGGCGTATTCAAGATCGCCGGAGGTATCTGGAAGATCGTGGGGGCGCTGCGCGCGGGCGGTGCGGCGGCCAGTGGCGCAACCGGTCTGCTTTCTGCGGTGGGCGTCGAGCTTGCCGCGCTCGCCTCGAGTGCGGCCGCCGTCGGCGCGGCTTTCCTCGGCTGGAAAATCGGCGACGGCGTGCGCGACCAGATCGACGGTCTGATCACGAAGCTGTCGGGCGGCCGCTTTCGCTCGCTGTGGGACATCCTCACGCTGAAGGATCGCCGCGGCCTCGACGCTACCGGCGGCTACACGCAGGAGGAAATCGACAGCGTCAAGGATGGCGGCGGCGCGAAATTGACGCCGCCGCGCGTCGAGCAGTCGCGTACCCCTGCGACGTCATTGGCTGCACCGGAACCCACTCTGACGCAGGGTGGCGCAAAGCCGTTGGCACCGGTGCCGCAGCCTTCCGGTACGCGGAATCCGATACCACAACTCGTTCCGGCGCCGATACTGGCGCCGCGGATCGAGCGTGTTTCGGCTCCCGACGACAGCGGTCTCGCCGGCCGTCTCAGCCAGCTCGCGGACACGGCGTTCGGCAAACTGATCGCACGCGGCGAAGGCGATTACAACAGCGTGAACCGCGGCGCGCGCGGCGGTTACCGTGCCGGCACTGAGAACCTCGAAGGCATGACGCTGGCGCAGGTCATGGCCGCGCAGCGCGCGGGGCAGTTCAACGCGGCCGGCCGCTACCAGATAATCGGCAGCACCCTGGCCGAGGCCGCGCGCGGGTTGAAGTTGAGCGGGTCCGAGATGTTCGACCGGAAGCTGCAGGACCGGATCTTCGAGCAGTATCTGGTGCGCAACAAGCGGCGCGCGATCGCCGACTATGTCGAAGGGCGTAGCGACGATCTGCGCGGCGCGCTGCGCGCATCGTCGCGCGAGTGGGCTAGTGTCGCGGACCCGGACACCGGTCGCAGCTACTACGCCGGTAAAGGCAACAACCGCGCGAGCATTACGGCCGCCGAGATGGAGACCGCGCTGCGCAACACGCGCGCGACGTACCAACCGGCCGGCGCGCTGGCCGCGCAGTCGGCGGCGCGCGGCGGACCGGCAAAGGTCGAGCTGCATCAGTCCACGCAGATCCACGTGACCGGCTCGGGCGATCCTTCGGCGGCCGGTCGCGCGGTTGAGCGCGAGCAGCGCGCGGTCAACTCCGACATGGTGCGCAACATGCAGGGGGTAATCGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e2872ba813d68474bed21cbd051e79c89e1c2509daefc32eb6d8e518cccfc285
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7194
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50