Protein

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Genbank accession
XPO96675.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVATGADIDYATNAVTGQTQKTLPAVLRDAGFSPVSWDFSTGGTLNDGDRGKVVYDPVSKTWYSYAGLFPVTVPADFNPVGNADWMPQTDPSLSDRVGTLEGKISVLADKTIDWVTPDQFKLPGAVDDTAAFTAALAVSKRIKLMARTYYVNADTIVTSSDDVYIIGEGSAHTKIVANSNGSKLIGLDGLPGSPFTVRHVYPYRASPLMGTGW
Physico‐chemical
properties
protein length:246 AA
molecular weight: 26016,89720 Da
isoelectric point:4,97684
aromaticity:0,08943
hydropathy:-0,09187

Domains

Domains [InterPro]
DC_1596
STR
1–238
DC_1596
IPR012334
STR
154–234
IPR012334
XPO96675.1
1 246
Architecture
STR
STR 1-238 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO96675.1
1 246
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,9928
Central domain 162 235 75 0,9879
C-terminal 236 246 10 0,1492
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-235
C-terminal
236-246

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EM1
[NCBI] 		3385242 Viruses >
Host Escherichia marmotae
[NCBI] 		1499973 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO96675.1 [NCBI]
Genbank nucleotide accession
PQ571293.1 [NCBI]
CDS location
range 29030 -> 29770
strand +
CDS
ATGTCAAGCGGATGTGGTGACGTTTTAAGCCTGGCGGATTTACAAACCGCCAAGAAGCACCAGATTTTCGAAGCCGAGGTTATCACCGGTAAATCCGGCGGGGTGGCTACTGGCGCTGATATTGATTACGCGACCAATGCTGTTACAGGTCAGACGCAGAAGACGCTCCCGGCGGTACTGCGCGATGCTGGGTTTTCTCCAGTATCGTGGGACTTCTCTACCGGCGGCACATTAAACGACGGAGACCGCGGCAAAGTAGTATACGACCCTGTTAGTAAAACATGGTACTCATATGCGGGATTGTTCCCGGTTACAGTTCCCGCGGATTTCAATCCGGTAGGTAATGCCGACTGGATGCCGCAAACGGACCCTTCGTTATCAGACAGGGTGGGTACCTTAGAAGGTAAAATTTCGGTATTAGCTGATAAAACAATCGATTGGGTTACACCGGACCAGTTCAAATTGCCAGGAGCAGTGGATGACACCGCGGCTTTTACCGCGGCGCTGGCTGTCTCAAAAAGAATAAAATTAATGGCACGCACGTACTACGTGAATGCGGACACGATTGTAACATCTTCCGACGATGTTTATATTATCGGAGAAGGTAGCGCTCATACAAAAATAGTAGCAAATAGCAATGGATCAAAATTGATAGGTCTTGACGGATTGCCGGGGTCTCCTTTCACCGTACGTCACGTATATCCATACAGGGCGTCACCCTTGATGGGAACGGGATGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
44ae3719b203ade27566d9cb9154b101defd93d9f679128f04962241c29a952f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7850
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50