Protein

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Genbank accession
WJJ54284.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MPIGVNVSGTNKQATMKVNVGGVWKLPIGWVRENGVWKKFQNPEFTYTISQNTTNFNLFSAIGNREETIINLVINSGVNVYSNNVGIPALLIPNSFADKTINIINNGNIYGQGGVGGTGQGQAGGPALRVQTAQKINLTNNGTIAGGGGSGGKGGTGGNGFFTTQSTQRDPSSGTWTYATGNHIEFRSRNCILRMGNSEIYRWYGPDFGTVVTYGITITVGEWTYYASNFYGDGVGVLKSNAMYRTRTVTNTTYTTGGAGGNGGNGQGFSQAATNGLAGANGGTNAGRGGNGGNGGTFGVAGATGATGASGNQTAGLGGQAGGAAGGAVDGTSKVNYVNAGKLLGPLIN
Physico‐chemical
properties
protein length:349 AA
molecular weight: 35387,54280 Da
isoelectric point:9,70792
aromaticity:0,08883
hydropathy:-0,27765

Domains

Domains [InterPro]
DC_1762
ATT
1–180
DC_1762 DC_1092
IPR007932
RBD
57–156
IPR007932
WJJ54284.1
1 349
Architecture
ATT
RBD
ATT 1-180 | RBD 196-348 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JPW
[NCBI] 		3046621 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ54284.1 [NCBI]
Genbank nucleotide accession
OR039881.1 [NCBI]
CDS location
range 14340 -> 15389
strand +
CDS
ATGCCAATCGGAGTGAATGTTTCAGGAACAAACAAACAAGCCACAATGAAAGTTAATGTTGGTGGGGTTTGGAAGCTACCGATTGGTTGGGTTCGTGAAAACGGGGTATGGAAGAAATTTCAGAACCCCGAATTTACCTACACAATCAGTCAGAATACCACTAACTTTAATCTATTCTCTGCTATCGGTAATAGAGAAGAAACTATTATTAATTTAGTTATTAACTCAGGTGTTAATGTATATTCCAATAACGTAGGTATCCCTGCCTTACTTATTCCAAATAGTTTTGCAGATAAGACAATTAACATCATTAACAATGGTAATATTTATGGTCAGGGAGGGGTAGGTGGAACTGGGCAAGGTCAAGCTGGTGGGCCAGCTCTACGAGTACAGACTGCTCAAAAGATTAACTTAACCAATAACGGCACAATCGCCGGTGGAGGCGGTAGTGGTGGTAAAGGCGGTACAGGTGGTAACGGCTTCTTCACTACTCAATCTACACAACGTGACCCTTCATCTGGAACTTGGACATACGCTACAGGGAACCATATCGAATTTCGTTCCCGTAACTGCATCCTACGTATGGGTAACTCCGAGATATATCGTTGGTATGGTCCAGACTTTGGCACGGTTGTTACCTATGGTATCACTATAACCGTGGGAGAGTGGACGTACTATGCCTCCAACTTCTACGGTGACGGTGTGGGTGTTTTGAAGTCTAACGCAATGTACCGAACTAGAACAGTGACCAATACTACATACACTACCGGTGGTGCCGGTGGTAATGGGGGAAACGGTCAAGGATTCTCACAAGCAGCAACAAACGGTCTAGCCGGTGCTAACGGTGGGACTAACGCAGGTCGAGGTGGTAACGGAGGTAATGGTGGTACTTTTGGTGTGGCAGGTGCAACTGGAGCCACGGGGGCATCTGGAAACCAGACTGCTGGACTTGGTGGTCAAGCTGGAGGTGCTGCTGGAGGTGCCGTTGATGGTACGTCTAAAGTTAACTACGTCAATGCTGGTAAACTGTTAGGTCCTCTAATCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c4f5d76381a3cd8611565c9a399a601ff2306bdb716a1eec5f34632013fd633
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8816
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50