Protein

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Genbank accession
NP_852575.1 [GenBank]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MILIEYKNRDIFNTFIFSDVKPIIIPHHPTGPTGVTGRTGITGPTGVTGRTGITGPTGVTGPTGVTGKTGVTGPTGDTGSTGITGPTGVTGPAGVGLTNYLYIFDTTNQSIVVGGSVTFNTNGPIIGSAFTHIAGTGNITINTRGTYVAEFQLEAARENQFSFALNGTPIPGGRYGTGSPHSINQGTVAFTVTTVPSTLTLINNTSSAGTITLSNNDGGSLTNVSASISIFQVG
Physico‐chemical
properties
protein length:234 AA
molecular weight: 23609,99560 Da
isoelectric point:6,90124
aromaticity:0,06838
hydropathy:0,05641

Domains

Domains [InterPro]
DC_0791
STR
28–70
DC_0791 IPR008983
IPR008160
STR
35–90
IPR008160 IPR008983
NP_852575.1
1 234
Architecture
STR
RBD
STR 28-90 | RBD 94-233 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage phBC6A52
[NCBI] 		225726 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus cereus
[NCBI] 		1396 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_852575.1 [NCBI]
Genbank nucleotide accession
NC_004821 [NCBI]
CDS location
range 13455 -> 14159
strand -
CDS
GTGATTTTGATAGAATACAAAAATAGAGATATATTCAATACATTTATTTTTTCAGATGTTAAACCTATTATCATCCCCCACCATCCAACTGGACCGACTGGTGTTACTGGAAGGACTGGTATTACTGGACCGACTGGCGTTACTGGAAGGACTGGTATTACTGGACCGACTGGTGTTACTGGACCGACTGGCGTTACTGGAAAGACTGGTGTTACTGGACCGACTGGTGACACTGGATCTACTGGCATTACTGGACCGACTGGTGTTACTGGTCCTGCTGGTGTAGGTTTAACAAACTACCTATATATTTTTGATACTACCAATCAGTCAATTGTAGTAGGTGGCAGTGTCACTTTTAATACCAATGGACCTATAATAGGTAGCGCTTTTACCCATATAGCGGGCACTGGAAATATTACAATTAACACCAGAGGAACATATGTAGCAGAATTCCAGTTAGAAGCTGCTCGTGAAAACCAATTTTCCTTTGCACTAAATGGTACACCAATTCCTGGTGGTCGTTATGGAACTGGGTCTCCACATTCTATAAATCAAGGTACTGTTGCTTTCACAGTAACAACTGTTCCTTCAACATTAACTTTAATAAATAATACTTCTTCAGCAGGTACTATCACCCTATCTAATAATGATGGCGGCTCTTTAACAAATGTATCTGCAAGTATAAGTATTTTTCAGGTAGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f1c61842469bd9363e6eee914c606d2caf169d92e922f3bf76e66f929e7d2c5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8363
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The number of ribosomal RNA operons in Bacillus cereus Candelon,B., Gailloux,K., Ehrlich,D.S. and Sorokin,A. 2004-03-01 — GenBank