Protein

Genbank accession
AIX44902.1 [GenBank]
Protein name
tail collar domain protein
RBP type
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MSQINFPNSPSDGEEFLASNGTTYRYDSSTGQWKILSGPGVQGPAGNTGPTGSIIMWGTSTLPEGYIECNGQSTSGYTALAALYGSNVPDLRGEFVRGWDNGKGTDSGRALLGSQGESFKSHTHTQNSHNHSQNSHNHTQNPHKHTQQLGGTISSDLLQSGSYRIGNANSASVSNTTATNKSTTATNNAATATNQSTGDTETRPRNISLMYIIKT
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22715,16530 Da
isoelectric point:6,69696
aromaticity:0,06512
hydropathy:-0,79070

Domains

Domains [InterPro]
IPR051934
39–214
IPR051934
SSF88874
47–214
SSF88874
IPR037053
49–97
IPR037053
IPR011083
52–96
IPR011083
AIX44902.1
1 215
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014f
[NCBI] 		1493511 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX44902.1 [NCBI]
Genbank nucleotide accession
KJ019155 [NCBI]
CDS location
range 211914 -> 212561
strand +
CDS
ATGTCTCAAATTAATTTCCCAAATAGCCCATCCGATGGTGAAGAGTTTCTAGCATCTAATGGAACTACGTATCGATACGATAGTTCTACGGGTCAGTGGAAGATTCTATCAGGTCCTGGTGTTCAGGGACCCGCTGGTAATACAGGTCCTACTGGATCTATTATTATGTGGGGAACTTCAACACTACCAGAGGGATATATCGAATGTAATGGTCAATCTACTTCTGGATATACAGCTTTAGCTGCGTTATATGGTTCCAATGTCCCAGATCTTCGTGGTGAGTTTGTAAGGGGTTGGGATAACGGTAAGGGTACTGATAGTGGTCGGGCTCTATTGGGTAGTCAAGGCGAATCGTTTAAAAGCCACACACACACTCAGAATTCACACAATCACAGTCAGAATTCACACAATCACACACAGAATCCCCACAAACACACGCAACAACTGGGTGGAACTATTTCATCTGACCTTTTGCAATCCGGGAGCTATCGGATTGGTAACGCAAATTCTGCATCAGTTAGTAATACCACAGCAACCAATAAATCTACTACAGCAACCAATAATGCAGCCACAGCAACCAACCAAAGCACAGGTGATACTGAAACCCGTCCACGCAACATATCTTTGATGTATATTATTAAGACCTAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
7ea823a9784c9c2088431c5bc6ab5bab34ff41dca9794a4ddb20b07207dd689d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7715
Evidence 0,7715
Download PDB

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank