Protein

View in Explore
Genbank accession
XAQ48616.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAFATGTAANHVDALDKLRLFLTANESLAAAGQTWQQLRWVPDNLDSVDTTLPFSSGVSLHRMFRPDSRTQNYNDDANGQYLSSTSFTPDQYVRLKMRAARAVTRFTLKAGQSSNVRNYTPRNFRLEYSDDGSAWSTALDVTEQRAWTANEERTFTVPSATGEHLWWRLVTKQTGDYGGTLTGSQWELRSLWLYDGSELVSSSESYLVVKGPGLAGDEEIFAAFRTSYNTGTGEYFMMVQGLTGYLPNEQSPHRQPGLHPSGWPVVPLWGASMPFWFVGSGRRVVFVFKVSTVFEAGYAGFFLPYASPQQYPYPMAIGGSMSPRSDSYRYDFVSAAHSAFPMPGSYTSVSGSDVAAFSTTLNVMLPDGSWFDMHNRPSSGGQSESYSRWSSSPGSVLPHGMFDGNNSSSSAGYGIRENVGGGFTVLPSTLFQRQPSGRFLGELDGCFQISGFQNGSENTGTIEGEDYVVFQNTYRTDVREYWALKAE
Physico‐chemical
properties
protein length:487 AA
molecular weight: 53772,72590 Da
isoelectric point:5,37477
aromaticity:0,13552
hydropathy:-0,41314

Domains

Domains [InterPro]
DC_0072
STR
1–124
DC_0072 DC_0072
G3DSA:2.60.120.260
STR
55–191
G3DSA:2.60.120.260
IPR008979
STR
71–156
IPR008979
IPR000421
RBD
75–159
IPR000421
DC_0072
STR
108–170
DC_0072
XAQ48616.1
1 487
Architecture
STR
STR 1-487
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_XeuM-YB23
[NCBI] 		3144279 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas euvesicatoria
[NCBI] 		456327 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAQ48616.1 [NCBI]
Genbank nucleotide accession
PP756300 [NCBI]
CDS location
range 32762 -> 34225
strand +
CDS
ATGGCCTTCGCAACGGGCACGGCCGCCAACCACGTGGACGCGCTGGACAAGCTGCGCCTGTTCCTGACCGCCAACGAGAGCCTGGCAGCCGCCGGGCAGACCTGGCAGCAGCTGCGGTGGGTCCCCGACAACCTGGACTCCGTGGACACGACCCTGCCGTTCAGCTCGGGCGTGTCCCTCCACCGCATGTTCCGGCCGGACTCCAGGACCCAGAACTACAACGACGACGCCAACGGTCAGTACCTGTCGTCGACGTCGTTCACCCCGGACCAGTACGTACGCCTGAAGATGCGCGCAGCGCGGGCCGTGACGCGGTTCACCCTCAAGGCCGGGCAGAGCTCGAACGTCCGGAACTACACGCCGCGCAACTTCCGGCTAGAGTACTCGGACGACGGCAGCGCGTGGTCCACCGCGCTGGACGTCACCGAGCAGCGCGCCTGGACCGCCAACGAGGAGCGCACCTTCACCGTGCCCTCCGCCACGGGCGAGCACCTGTGGTGGCGCCTGGTCACCAAGCAGACCGGCGACTACGGCGGCACCCTGACCGGCTCCCAGTGGGAGCTCCGGTCCCTGTGGCTGTACGACGGCTCGGAGCTGGTGTCGTCCTCGGAGTCCTACCTGGTGGTCAAGGGCCCGGGCCTGGCGGGCGACGAGGAGATCTTCGCAGCCTTCCGCACCAGCTACAACACCGGCACGGGCGAGTACTTCATGATGGTGCAGGGCCTCACCGGCTACCTGCCTAACGAGCAGTCCCCGCACCGCCAGCCGGGCCTGCACCCGAGCGGGTGGCCGGTCGTGCCCCTCTGGGGCGCCTCCATGCCCTTCTGGTTCGTGGGCAGCGGCCGCCGCGTGGTATTCGTGTTCAAGGTGTCCACCGTCTTCGAGGCGGGGTACGCCGGGTTCTTCCTGCCCTACGCCTCACCCCAGCAGTACCCGTACCCGATGGCGATCGGCGGCTCCATGTCGCCCCGCTCGGACAGCTACCGGTACGACTTCGTGTCGGCAGCGCACAGCGCCTTCCCGATGCCGGGCAGCTACACCAGCGTCTCGGGCAGCGACGTGGCGGCGTTCAGCACCACCCTCAACGTGATGCTGCCGGACGGGTCCTGGTTCGACATGCACAACAGGCCGAGCTCCGGCGGGCAGTCCGAGTCGTACTCCAGGTGGTCCAGCTCCCCGGGCTCCGTCCTGCCGCACGGGATGTTCGACGGCAACAACTCCTCGAGCAGCGCCGGCTACGGCATCCGGGAGAACGTTGGCGGTGGCTTCACCGTCCTGCCATCGACCCTGTTCCAGCGCCAGCCGTCGGGGCGGTTCCTGGGCGAGCTGGACGGCTGCTTCCAGATCTCGGGGTTCCAGAACGGCTCCGAGAACACCGGCACCATCGAAGGGGAGGACTACGTGGTCTTCCAGAACACCTACCGAACCGACGTACGCGAGTACTGGGCCCTCAAGGCGGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b8c054407a5c6094851fd3846e4700976ed6db71647463775274ccfb404f6e82
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7279
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
complete genome sequence of Xanthomonas phage vB_XeuM-YB23 Kim,Y.B., Park,E.J. and Kim,J.H. 2021-01-07 — GenBank