Protein

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Genbank accession
QPI17705.1 [GenBank]
Protein name
putative long tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MANTLFKYTGNGVRTVYPASFSLGYLRKEDIYVYTGANTEFNENGIPFSWVGDNQIELDEPVEFGTELTIRRVVNRTQAINNYEEGAILRESNLDASFAQALMILEELADGFFDPLNDNGFGGGSLDYVPTKDLDMNGFSILNADVVEANSFLHSRVGDLVDYINERTADTVDDSIRTDILLNEDGLIVNAFHDVLGRQGYFPSEAGTSEGQFLLIRAAILSFQSTNDYKWLAIAFKLKSNIDKLYLKPPPEDPNELYIPHWLFIVKKAVEMQSSDNALKVTMVKDSEGLNYVGQITPSVIKVVENPDTVETPIVTEPVYDQELPEPIISATSSDLQLVSSSGRTIDDVIASGDLAIDGEATVTNVTEVDYNKTTQPLVTIEGQRGELVLRVVRAYSTDADTRLDFNNPFAGVIGTDYGAPSAVFTSDEFGTVFHIPVNQFPEDTPNTIEVNVIAIFDFGETAEVSENIEAWPHWRILEETEISCAVDTLPWAYEAFDLLEQTVSDDKYTLAKNATAANIYNVFDVDDGRPWIKPFKGNPTDMSGTYFFSTREGFTVDSISQGENLSTRIEVPAGSGEAQYGRGVVDEVKVQDTGVLLDWDIDNLGSSTIRVFIQKGPKETTATRYYYDVNSSNTANNFSGEMEITWDKFVPYRLGGNGWFEVIDPIVDLQDIDVVGFVVETPDAVSFTVRRFRPVPEITLPYTPHVAPFTANAIEGQIIDWRGGAGIGYQDPVIWAKLGNTAGLSGMLQFLEDSQAEYASRYNDDGLFMPAYVWDRFDRGSVTTAPIDTWTFDWVDPNTEWVGYNARCVASCAEAGDIVAQSDPTNSARALTIANKFMTLIRNAWTDPNKYPPTNFPESITELTRSTYYEKGERVSKYDGFMYEALSSGTTSATDFQFPTEIGATQVDGTIAFKCIGYTYTQSPVYGNYEEPHAVALFMRAACYLYRNGIDTASNLAFIQQGWTYLERLWADAQNYEALRNTWSGNPSAGEYFGFWTGEIVTILAKLLNEFDDIRQTAGISSSDIKDRLAKHAEWIVAATRGGIEDAGFLALALIADDLNINIEDLTGRVEVLEQGGSGTPTAEEVKTLYESNADTNAFTDAEQTKLADAYAGGDLLVNGDFSVELTTSKFASIRRAVNSSQGAILEYRRSRGTLETPTASQDFDNLGGMYAYGYDGVDYQLTAGFTYYVDGVVAENAVPTGFKLFTSPDVVANAKNRFIVKPNGNIQFMESDGTTVGVEWDAVGKRLSVAGAGVITSEVPIYDNWQDIPLEFRGYCRVKSNATDRPLGLPNRSFECITYGADRNFLVISQAITPSEMFNVYRAPTGEYEVQAKISDSKGKSYVDVTSGDVVLSALDSDVPVLQIGGTPTVSSTVTLSALTRMWVVTNDSTQGVTLSTGNGGTVFVEAGYQSVVFGDGVGIRQSMTIATNGLKMNGDLILPIYSVATLPDPTTRYMVAVGCTDGDSGSPCLAVSDGGSWKRVALGATVSAT
Physico‐chemical
properties
protein length:1492 AA
molecular weight: 163415,60970 Da
isoelectric point:4,30728
aromaticity:0,10724
hydropathy:-0,19115

Domains

Domains [InterPro]
DC_1548
STR
1–234
DC_1548 DC_0061 Coil
IPR005604
ATT
4–112
IPR005604 DC_1390
QPI17705.1
1 1492
Architecture
ATT
STR
STR
ATT 1-112 | STR 113-234 | STR 698-1492
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI17705.1
1 1492
Domain Start End Length (AA) Confidence
N-terminal 1 478 478 0,9709
Central domain 479 815 338 0,8705
C-terminal 816 1492 676 0,3577
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-478
Central
479-815
C-terminal
816-1492

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AmeP_R8W
[NCBI] 		2774152 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alteromonas sp.
[NCBI] 		232 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI17705.1 [NCBI]
Genbank nucleotide accession
MW043865 [NCBI]
CDS location
range 39430 -> 43908
strand +
CDS
GTGGCAAATACACTTTTTAAATATACGGGTAACGGTGTTCGCACCGTCTACCCTGCTTCGTTTAGTTTAGGTTATTTACGTAAAGAAGATATATACGTTTACACTGGTGCAAACACAGAGTTTAACGAAAACGGTATACCTTTTAGTTGGGTAGGTGACAACCAGATAGAACTAGACGAGCCTGTAGAGTTTGGTACGGAATTAACGATTCGTCGTGTAGTTAACCGTACACAGGCAATAAACAATTATGAAGAGGGTGCGATACTAAGAGAAAGTAACTTAGACGCATCATTCGCACAAGCATTGATGATACTAGAAGAACTAGCAGATGGTTTCTTCGACCCGCTTAACGATAACGGTTTTGGTGGTGGTTCGTTAGATTACGTACCCACAAAAGACCTAGATATGAATGGGTTTAGTATATTAAATGCAGATGTTGTTGAAGCTAACAGTTTCTTACATTCACGTGTAGGTGACTTAGTAGACTACATCAATGAACGTACAGCAGATACAGTAGATGACAGTATTCGTACTGATATACTACTGAACGAAGATGGTCTGATTGTAAACGCATTCCACGATGTACTAGGTAGACAGGGTTACTTCCCATCAGAAGCTGGTACAAGTGAAGGTCAGTTCCTATTGATTCGTGCTGCGATATTATCGTTTCAAAGTACGAACGACTATAAGTGGTTGGCGATAGCGTTTAAGCTAAAATCAAATATCGACAAGTTATATTTGAAGCCACCACCAGAAGACCCAAATGAGTTGTATATACCTCACTGGTTGTTCATTGTTAAGAAAGCTGTAGAGATGCAGAGTTCAGACAATGCGCTGAAAGTTACAATGGTTAAAGACTCAGAAGGTTTAAACTATGTTGGACAGATTACACCATCTGTAATAAAAGTTGTTGAGAATCCTGATACAGTAGAAACACCTATAGTAACAGAGCCGGTATATGACCAAGAGTTACCAGAACCAATAATCAGTGCAACATCTTCAGACTTACAACTTGTATCGTCATCAGGTAGAACGATAGATGACGTTATTGCGTCAGGTGACTTAGCAATCGATGGCGAAGCAACTGTAACAAATGTAACAGAGGTAGACTATAACAAAACTACGCAGCCATTAGTTACAATTGAAGGGCAACGTGGTGAGTTGGTACTACGTGTAGTACGAGCGTATAGCACTGATGCTGACACACGACTAGACTTCAATAACCCATTCGCAGGTGTTATTGGTACAGACTATGGCGCACCATCAGCGGTGTTTACTTCTGACGAGTTTGGTACGGTATTCCATATACCAGTAAACCAGTTCCCAGAAGATACACCTAATACGATAGAAGTTAATGTAATAGCAATATTCGACTTCGGTGAAACAGCGGAAGTATCAGAAAACATTGAAGCATGGCCACACTGGAGAATCTTAGAAGAAACTGAGATAAGTTGTGCTGTCGATACTTTACCTTGGGCTTATGAAGCGTTTGACTTATTAGAACAAACTGTTAGTGACGATAAGTACACATTAGCTAAGAACGCAACAGCAGCTAACATTTACAACGTATTCGATGTAGATGATGGTAGACCGTGGATTAAACCATTCAAAGGTAATCCAACTGACATGTCTGGTACGTATTTCTTCTCGACAAGAGAAGGATTCACAGTAGACAGTATTAGTCAGGGTGAGAACCTATCTACACGTATTGAAGTACCAGCAGGTTCTGGTGAAGCACAGTACGGTCGTGGTGTAGTAGATGAAGTTAAAGTACAAGATACTGGTGTACTTCTAGATTGGGATATTGATAACTTAGGTAGTTCTACTATCAGAGTATTCATACAGAAAGGCCCGAAAGAAACAACTGCAACACGTTACTACTACGATGTTAATTCTAGTAATACCGCTAACAACTTTAGTGGTGAGATGGAAATAACATGGGATAAGTTCGTACCGTATAGACTAGGTGGTAATGGCTGGTTTGAAGTAATAGACCCAATTGTAGACTTACAGGATATTGATGTAGTCGGGTTTGTTGTTGAGACACCAGACGCAGTATCATTCACAGTACGTAGATTTAGACCTGTACCTGAGATAACACTACCATACACACCACACGTTGCACCGTTTACAGCAAATGCTATAGAAGGTCAGATTATTGATTGGCGTGGTGGTGCTGGTATCGGCTACCAAGACCCAGTTATTTGGGCGAAGTTAGGTAACACAGCAGGACTATCAGGGATGTTACAATTCCTAGAAGACAGTCAGGCGGAGTATGCTAGTCGCTATAATGATGATGGTCTGTTTATGCCCGCGTATGTTTGGGATAGATTTGATAGAGGTAGTGTTACAACTGCACCTATTGATACTTGGACGTTTGATTGGGTAGACCCTAACACGGAGTGGGTAGGTTATAACGCACGATGTGTAGCGTCATGTGCAGAAGCAGGTGACATAGTAGCACAGAGTGACCCGACAAACTCAGCAAGAGCGTTGACGATTGCTAACAAGTTTATGACATTGATACGTAATGCATGGACTGACCCAAATAAGTACCCACCTACAAACTTCCCTGAGTCAATAACAGAATTGACACGTAGTACATACTACGAGAAAGGTGAACGAGTATCAAAGTACGATGGGTTTATGTACGAGGCGTTAAGTAGTGGTACAACGTCAGCAACTGATTTCCAGTTCCCTACTGAGATTGGTGCAACACAAGTAGACGGTACGATAGCGTTTAAGTGTATAGGTTACACATACACGCAAAGTCCTGTATATGGTAACTATGAAGAACCACATGCTGTAGCACTGTTTATGAGAGCTGCGTGTTATCTATATCGGAATGGTATTGATACAGCGAGTAACTTAGCGTTCATACAACAAGGTTGGACTTACTTAGAACGACTTTGGGCAGATGCACAAAACTACGAAGCTTTACGTAACACTTGGAGTGGTAATCCGTCTGCGGGTGAGTACTTTGGTTTCTGGACTGGTGAGATAGTAACAATTCTAGCTAAGTTGTTAAATGAGTTTGATGACATTAGACAAACTGCTGGAATATCAAGTTCAGATATTAAAGACAGACTAGCAAAACATGCAGAGTGGATTGTAGCAGCTACTAGGGGTGGTATTGAAGATGCTGGTTTCTTAGCGTTAGCATTAATTGCTGATGACTTGAACATCAATATCGAAGACCTGACCGGTAGAGTCGAAGTACTTGAGCAAGGTGGTAGTGGAACACCTACTGCGGAAGAAGTGAAAACCTTATACGAAAGTAATGCAGACACTAACGCGTTTACTGATGCAGAACAAACCAAGTTAGCTGATGCTTACGCGGGCGGTGATTTGCTGGTTAATGGTGATTTTAGTGTAGAGTTGACTACTAGCAAATTCGCCAGCATCCGAAGAGCGGTTAATAGCTCGCAAGGAGCAATACTCGAATACAGAAGGTCACGAGGTACATTAGAAACACCCACAGCGAGTCAAGACTTTGATAACTTGGGTGGGATGTATGCTTACGGGTATGATGGTGTTGATTATCAACTGACCGCAGGATTCACTTACTATGTAGACGGTGTTGTAGCTGAAAACGCTGTGCCAACGGGCTTTAAGCTTTTCACTTCGCCTGATGTAGTTGCAAACGCCAAAAATAGGTTCATCGTAAAACCCAATGGCAACATCCAGTTCATGGAGTCAGACGGCACAACAGTCGGAGTTGAATGGGATGCAGTAGGTAAACGGTTGTCAGTGGCTGGCGCAGGTGTCATAACTTCAGAAGTGCCAATATACGACAACTGGCAGGATATACCTCTAGAATTTAGAGGTTATTGTAGAGTCAAGAGTAATGCAACGGACAGACCGTTGGGACTACCCAATAGGTCGTTTGAGTGTATAACCTATGGAGCAGATAGGAACTTTCTAGTAATATCGCAAGCAATCACACCTAGTGAGATGTTTAACGTTTACAGAGCACCTACTGGTGAGTACGAAGTACAGGCTAAAATTTCAGACTCTAAAGGTAAGTCTTACGTAGATGTAACGTCGGGCGACGTAGTTCTAAGTGCGTTAGACAGTGACGTACCTGTATTACAAATAGGTGGTACACCGACAGTTAGTAGCACGGTGACACTATCTGCATTGACACGCATGTGGGTAGTAACAAACGACAGTACACAAGGAGTGACGTTATCTACTGGTAACGGTGGTACAGTATTCGTAGAAGCTGGTTACCAGTCAGTAGTGTTTGGTGACGGTGTAGGTATACGTCAGTCCATGACCATTGCAACAAATGGTTTGAAGATGAACGGAGACCTTATCTTACCAATTTATAGTGTAGCTACATTACCTGATCCAACTACACGTTATATGGTAGCGGTTGGTTGTACAGATGGTGATAGTGGTTCACCATGTTTGGCAGTATCTGATGGTGGTTCGTGGAAACGAGTAGCACTTGGTGCAACCGTCTCTGCAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
668bb1c55715049fdf096e973eba4cd1fb3143e3e54a876e16e5171bc652e2d5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7320
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50