Protein

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Genbank accession
UDY80343.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKNSIIGSIRSLVAMAFIAVAGVSFAHGPSNQGGTVSASGQITAGSVYGTAGSISEGQAVAASAINGYGSSWQSAEGYTGGTATIGGVVNYQGAQVVTGTTQYAHTSGYGEVYGNAPINAGDSIANGNAAFGQTKVAASGNAQWGTVAIGAVGGIKATGVFAGYGGYGH
Physico‐chemical
properties
protein length:169 AA
molecular weight: 16278,60290 Da
isoelectric point:6,81132
aromaticity:0,08876
hydropathy:0,17751

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UDY80343.1
1 169
Domain Start End Length (AA) Confidence
N-terminal 1 105 105 0,2467
Central domain 106 158 54 0,8515
C-terminal 159 169 10 0,1419
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-105
Central
106-158
C-terminal
159-169

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage AXY1
[NCBI] 		2884451 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter xylosoxidans
[NCBI] 		85698 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UDY80343.1 [NCBI]
Genbank nucleotide accession
OK041469 [NCBI]
CDS location
range 15828 -> 16337
strand +
CDS
ATGAAGAACAGCATCATCGGCAGTATCCGTAGCCTGGTGGCCATGGCTTTCATCGCAGTCGCAGGCGTCTCGTTCGCCCACGGCCCTAGCAACCAGGGCGGCACCGTCTCCGCGTCCGGCCAGATCACGGCAGGCTCGGTGTACGGCACGGCCGGGTCGATCTCCGAAGGCCAGGCAGTGGCGGCCAGCGCGATCAACGGCTACGGCTCGTCCTGGCAGTCCGCTGAAGGCTACACGGGCGGCACGGCCACCATCGGCGGCGTCGTCAACTACCAAGGCGCGCAGGTCGTCACCGGCACCACGCAGTACGCCCACACCAGCGGTTACGGCGAAGTCTACGGCAATGCGCCGATCAACGCAGGCGACAGCATCGCCAACGGCAACGCGGCATTCGGTCAAACGAAGGTCGCAGCCAGCGGCAACGCGCAGTGGGGAACCGTGGCCATTGGCGCCGTGGGTGGCATCAAGGCGACGGGCGTGTTCGCGGGCTACGGCGGCTACGGCCACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5dd61ba911d56c7f112684b6b8d2b2a32debfab0797c97408b0d772e6c21bdfb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2924
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and formulation of novel lytic bacteriophages for use against Pneumonia causing bacteria Ku,H. 2020-10-08 — GenBank