Protein

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Genbank accession
XYL02123.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MLKHQDGFDHYADIGKKGSVVEPYLKAAGYDIRNATDDTFQIDLGRRDGAKSLKFTVERNSSTNASLSWGFTPAGNYACFGFAMKANGSRMRVCRVENLVDVEWNSEDGKLEIDGQKGVNPLILNAWYFFEIELDKSAKKVTVWVNNEKQIEATLTTSWPEKLVLVWGQVGTAPNAGIQYLDDFYAMDDSGSVNTSRLGPIEVATRAPTSDITTEWEIVNGTNENHYQVASQLEPGRPNAPYLQSNKSGAKDIFRSNTILPTNNKVFGVSVIAYARKGDLDDRKLGMVIQTDGGSEKEVQVPLTEDYKYYQVTHEQTPGNTDWNKGAVEALQFGIVTR
Physico‐chemical
properties
protein length:338 AA
molecular weight: 37542,40350 Da
isoelectric point:5,12906
aromaticity:0,09763
hydropathy:-0,52012

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL02123.1
1 338
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,0647
Central domain 146 327 183 0,1377
C-terminal 328 338 10 0,9837
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-327
C-terminal
328-338

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage pPM01
[NCBI] 		3433637 Viruses > unclassified bacterial viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL02123.1 [NCBI]
Genbank nucleotide accession
PV685962 [NCBI]
CDS location
range 24664 -> 25680
strand -
CDS
ATGTTAAAACATCAAGACGGTTTCGACCACTACGCAGATATCGGCAAAAAAGGTTCCGTAGTCGAGCCGTACTTAAAAGCAGCCGGGTATGATATCCGAAATGCTACGGACGATACGTTCCAGATTGACTTAGGTCGACGTGACGGCGCTAAAAGCCTCAAATTTACCGTAGAACGTAACTCCTCAACCAATGCGTCGTTATCGTGGGGATTCACGCCGGCCGGTAACTACGCGTGTTTTGGTTTCGCGATGAAAGCCAATGGTTCTCGTATGCGAGTATGTCGGGTTGAGAACTTGGTCGACGTGGAATGGAACAGCGAAGACGGTAAGCTAGAAATTGACGGCCAAAAAGGGGTAAACCCGCTGATACTTAATGCGTGGTATTTCTTCGAGATTGAACTCGATAAGTCCGCGAAGAAAGTAACCGTGTGGGTTAATAACGAAAAGCAAATCGAGGCGACCCTTACTACTTCTTGGCCTGAAAAACTCGTTCTGGTATGGGGTCAAGTGGGCACAGCCCCCAATGCGGGTATCCAGTACCTAGATGATTTTTACGCCATGGACGATTCGGGGTCGGTAAACACTTCCCGCCTAGGGCCGATTGAGGTTGCTACTCGCGCGCCTACTTCGGACATCACGACCGAATGGGAGATCGTTAATGGTACGAACGAAAACCACTATCAAGTCGCCTCCCAATTGGAGCCGGGAAGACCTAACGCACCGTATTTACAGTCTAACAAGTCTGGCGCTAAAGACATTTTCCGGTCTAACACGATACTCCCGACTAACAATAAGGTTTTCGGAGTATCTGTGATTGCGTATGCCCGTAAAGGGGACTTGGACGACCGTAAACTCGGTATGGTGATCCAGACGGACGGCGGTTCTGAGAAAGAAGTCCAAGTTCCGTTGACCGAAGACTATAAATATTACCAAGTTACCCACGAACAAACTCCGGGTAATACCGACTGGAATAAAGGCGCTGTCGAAGCATTGCAGTTCGGCATCGTGACTCGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
984ea3fc15233fd2ef3b0cadf002b194b8042059da9861d6cd856d303eac446d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9545
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50