Protein

View in Explore
Genbank accession
AQY55334.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,59
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MLDNGLIMSPIPDDIVYVYDQNYNLLGASVEIFSKMYEDEIVTRARGKEVFTFESIETSSIYQHLKVENIISFGGRWFRIKYAQDVEDTKGLTKFTCYALWYELAEGLPRPLKHVATTVGVVAQDIIKDAGKWVQVVCPPDGANKRVRSITAKENSMLWHLRYLAKQYNLEITFGYEELLEQEVRIVRTVVFLQPYTESKVDFPLVVEENLKYVTRQEDSRNLCTAYKLTGKKEEGSQEPLTFASINNGSDYLIDVSWFTARQMRPRYIAKSKSDERFKIKENLMSAARAYLDIYCRPLIGYEASAVLYKKIPDLHHTQLIVDDHYSVIEWRKISSRKIDYDDLSQSVLTFQDPRRDLMDLLNEDGEGVLAGELETESHVVIRYADDILGTNFNAESGKYIGVISTTKHPNELVPDDFTWVKLQGPEGPQGEQGSPGRDGVDGVAGKNGVGIADTSITYAVSVSGTQEPGSGWSEQVPELTKGRFLWTKTFWRYTDGAHETGYSVAYIGQDGNTGKDGIAGKDGVGIAATEIMYASSNSATIAPAGGWSTQVPTVPQGHYLWTRTTWRYTDKTTETGYSVSRNGQDGAKGDPGRDGVPGKNGLGLKNTSVMYGISMNDTVQPGSWTSQVPALIKGQYLWTRTIWTYTDNTNETGYQKTYIPRDGNNGRDGIAGKDGVGIKSTTITYAGSTSGTVPPTTNWTSNIPNVQPGFFLWTKTVWTYTDNTSETGYSISKIGETGPRGLQGLQGPQGLQGIPGATGRDGRSQYTHIAFSDSPNGEGFSHTDQGRAYIGQYQDFSPEHSKDPAAYRWTKWKGNDGAQGIPGKPGADGKTNYFHIAYASSADGSREFSLEDNNQQYMGYYSDYEQADSTDRTKYRWFDRLANVQVGARNYVRNSKFLLNDNYWNKNTDANLEYDFTHSTRNKGRSGVHMFSKPDNAVIAQWRGLQQVVNEKGSANTSVTLSAFIAKDGLPQEAHLGIHFRNKGNIVAQAWLDIPLGTITNEYQRYALTAKSGVEFDSVNLMIYVGYNKVVNLYVTDIQFELANNASAYRESNEDIDERIDSKADQKLTNQQLTALTEKAQLHDAELKAKATMEQLSNLEKAYEGRMKANEEAIKKSEVDLILAASRIEATIQELGGLRELKKFVDSYMSSSNEGLIIGKNDGSSTIKVSSDRISMFSAGKEVMYLSQGVIHIDNGIFTQSIQVGRFRTEQYSYNPDMNVIRYVG
Physico‐chemical
properties
protein length:1226 AA
molecular weight: 136720,59230 Da
isoelectric point:5,56331
aromaticity:0,10359
hydropathy:-0,55832

Domains

Domains [InterPro]
DC_0700
STR
7–525
DC_0700 DC_1328 G3DSA:1.20.5.320 DC_0921
IPR010572
ENZ
147–329
IPR010572 PTHR24637 Coil
IPR007119
Unmapped
161–294
IPR007119 DC_1328 DC_1328
AQY55334.1
1 1226
Architecture
STR
STR 7-1226
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus virus MS1
[NCBI] 		1962672 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pneumoniae R6
[NCBI] 		171101 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus pneumoniae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AQY55334.1 [NCBI]
Genbank nucleotide accession
KY629621 [NCBI]
CDS location
range 35543 -> 39223
strand +
CDS
ATGTTAGATAACGGCCTAATAATGAGTCCTATCCCGGACGATATTGTTTATGTTTATGACCAAAACTACAATCTACTTGGCGCAAGCGTTGAGATCTTCAGTAAGATGTACGAAGATGAAATCGTAACCCGCGCAAGAGGTAAGGAAGTATTCACTTTTGAAAGCATTGAAACTTCTTCCATCTACCAGCATTTAAAAGTCGAAAATATCATTAGTTTTGGCGGTAGATGGTTCCGTATTAAGTACGCACAAGACGTCGAAGATACTAAAGGATTGACTAAGTTTACATGCTACGCTCTTTGGTACGAACTCGCTGAAGGACTTCCAAGACCTTTGAAGCATGTCGCAACTACTGTCGGCGTCGTAGCGCAGGACATTATCAAAGACGCAGGTAAATGGGTTCAAGTAGTATGTCCACCTGACGGAGCGAATAAAAGAGTTCGAAGCATTACGGCTAAAGAAAATTCAATGCTATGGCACCTACGCTATTTAGCAAAGCAATACAATTTAGAGATCACGTTCGGCTATGAAGAACTATTAGAGCAGGAAGTTCGAATAGTTCGAACAGTCGTATTTCTACAACCGTACACGGAGTCCAAGGTCGATTTTCCGTTGGTCGTTGAGGAGAATTTAAAATACGTGACACGACAAGAAGACTCCCGTAACCTGTGTACCGCCTACAAGCTCACAGGTAAGAAGGAGGAAGGAAGTCAGGAGCCTTTGACGTTTGCCTCAATCAACAATGGCAGCGACTACCTCATTGACGTCTCGTGGTTTACGGCTCGTCAAATGCGTCCTCGCTACATTGCGAAGTCTAAAAGCGATGAACGTTTTAAGATTAAAGAAAATCTAATGAGTGCTGCTAGGGCTTACTTGGATATCTACTGTCGCCCTTTGATTGGGTACGAGGCTTCAGCGGTCTTGTATAAAAAGATCCCAGACCTACATCACACTCAATTAATTGTCGATGACCATTATAGTGTTATTGAATGGCGCAAAATTTCGTCCCGAAAAATCGACTATGACGACCTATCGCAGTCTGTATTGACGTTCCAAGATCCAAGACGCGATCTTATGGACTTACTGAACGAAGACGGCGAAGGTGTATTAGCTGGAGAATTGGAGACTGAATCCCATGTCGTTATTAGGTACGCCGATGATATCTTAGGTACAAACTTCAACGCCGAATCAGGGAAGTATATTGGAGTTATTTCCACAACTAAACACCCTAATGAACTTGTCCCGGATGACTTCACTTGGGTTAAGTTACAAGGGCCTGAAGGTCCTCAAGGAGAACAAGGAAGTCCAGGACGCGACGGCGTGGACGGAGTTGCAGGGAAGAACGGAGTAGGTATAGCGGATACTTCTATTACCTACGCCGTGTCCGTGTCGGGTACACAAGAGCCTGGAAGTGGCTGGAGTGAACAAGTTCCTGAACTAACCAAAGGACGGTTCTTGTGGACGAAGACCTTTTGGCGATATACAGACGGAGCGCACGAAACTGGCTATTCAGTTGCCTATATTGGACAAGACGGGAACACAGGTAAAGACGGTATCGCAGGTAAGGACGGGGTAGGTATAGCTGCTACTGAAATTATGTACGCAAGTTCGAACTCGGCTACCATTGCTCCGGCTGGAGGATGGTCAACTCAAGTCCCTACTGTTCCGCAAGGACATTACCTTTGGACGCGAACCACTTGGCGCTATACGGACAAGACTACGGAGACTGGTTATTCAGTATCTCGTAACGGACAGGACGGCGCTAAAGGAGATCCAGGGCGTGACGGAGTTCCAGGTAAGAACGGACTTGGACTGAAAAATACTTCCGTAATGTACGGTATTAGTATGAATGATACTGTTCAACCTGGATCTTGGACAAGTCAAGTTCCTGCACTTATAAAAGGTCAATATCTATGGACTCGAACAATTTGGACCTATACGGACAACACTAATGAAACGGGTTACCAAAAGACCTATATTCCACGCGACGGAAATAACGGACGGGACGGTATAGCAGGTAAGGACGGAGTAGGGATCAAGTCTACGACGATTACCTATGCCGGATCTACCTCAGGGACAGTCCCACCTACTACGAACTGGACTTCGAACATTCCAAACGTTCAACCTGGCTTTTTCTTGTGGACAAAGACTGTTTGGACGTACACAGACAACACGAGTGAGACAGGGTACTCTATCTCCAAAATCGGCGAAACAGGTCCAAGAGGGTTACAAGGGTTACAAGGTCCGCAAGGGTTACAGGGTATTCCTGGAGCTACTGGACGTGATGGACGTTCACAGTATACTCATATAGCGTTCTCCGATAGTCCTAATGGTGAAGGATTTAGTCACACGGATCAGGGTCGTGCCTATATTGGACAGTATCAGGATTTTAGTCCTGAACACTCCAAAGACCCCGCCGCTTATCGCTGGACGAAGTGGAAGGGCAATGACGGGGCACAAGGGATACCCGGGAAGCCAGGCGCAGACGGGAAGACTAATTATTTCCATATAGCCTACGCTTCAAGTGCTGACGGATCACGTGAGTTCAGTTTGGAAGACAATAATCAACAATATATGGGTTATTACTCCGATTATGAACAAGCTGACAGTACCGACCGCACGAAGTATCGTTGGTTTGACCGTCTTGCTAATGTTCAAGTCGGTGCCCGAAACTATGTTAGAAATTCTAAGTTCCTACTGAACGATAATTATTGGAACAAGAATACCGATGCTAATTTAGAATACGATTTCACTCATTCTACTCGAAATAAGGGTAGAAGTGGGGTTCACATGTTCAGTAAACCTGACAATGCCGTTATCGCACAATGGAGAGGACTTCAACAGGTTGTCAATGAAAAAGGATCTGCGAATACTTCGGTCACCTTGTCCGCATTTATAGCAAAAGATGGACTTCCACAAGAAGCTCACTTAGGTATACATTTTAGAAATAAGGGTAATATAGTTGCGCAAGCATGGTTGGATATTCCTCTTGGAACTATTACTAACGAGTACCAAAGATACGCCCTAACTGCTAAAAGTGGAGTAGAGTTTGATTCTGTAAACCTGATGATCTATGTAGGTTACAATAAGGTAGTCAATTTGTATGTAACGGATATTCAATTTGAACTAGCTAACAACGCTTCGGCTTATAGAGAGTCTAACGAGGATATTGACGAACGGATTGACTCAAAAGCTGATCAAAAGCTGACTAATCAACAGTTGACGGCACTGACAGAAAAGGCACAGCTACATGACGCAGAGTTGAAAGCTAAGGCTACGATGGAGCAACTAAGTAATTTAGAAAAGGCTTACGAGGGTAGAATGAAAGCTAATGAAGAAGCTATCAAAAAATCGGAAGTCGACCTAATCTTAGCAGCAAGTAGAATTGAAGCTACTATCCAAGAACTCGGCGGTCTACGGGAGTTGAAAAAGTTCGTGGACAGTTATATGAGCTCTTCTAATGAAGGATTGATTATTGGTAAGAACGATGGTAGCTCTACTATTAAAGTATCAAGTGACCGAATATCTATGTTCTCCGCCGGTAAGGAAGTCATGTACCTTTCGCAAGGGGTTATTCATATCGATAACGGGATCTTTACCCAATCCATCCAAGTCGGGCGTTTTAGAACGGAACAATATTCGTACAATCCGGACATGAACGTGATCCGGTATGTAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d6cf7947c4638beb1417387fed845310dde936d3a6f131d9771da98984b41d10
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Streptococcus pneumoniae virulent phage MS1 Kot,W., Sabri,M., Gingras,H., Ouellette,M., Tremblay,D.M. and Moineau,S. 2017 28705957 GenBank