Protein

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Genbank accession
QOC57670.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALVSQNVKNLKGGISQQPDILRFPEQGAEQINGWSSETEGLQKRPPMVFTKTLGGKGSLGTWPYIHLINRDENEQYYAAFTGQGIRVFDLSGKEYAVRGNLDYVRCNSPRDELRMVTVADYTFITNRNYVCRSAGQLSDNGAFRADGDALINVRGGQYGRTLQVAFNGALRASYTIPDGSQKEHVTNTDAQWLAEELARQIREKTPGWEINVGPGFIHIKAPGNDHIWDLWTKDGYADQLINSVSHYVQSFNKLPLQAPAGYSVQIVGDTSKTADRYYVYFDWERKVWTERSGWNIRYTFDGNTMPHALVRTSDGNFELQTLPWTNRNSGDDDTNPYPSFIDSTVNDIFFFRNRLGFLSGENIVLSRTSKYFSFFPPSVANLSDDDPIDVAVSHNRVSTLKYAVPFTEELLLWSDEAQFVLSANGILSARSVELNLTTQFDVQDRARPYGIGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPSYIPNGVFDIHGSSTENFASILTGGAESKVFIYKFLYLDEEIRQQSWSHWDFGEGARVLAASSIGSTMFLVIENDFNVFMGYVQFVKNTIDIAGEPYRVFLDAKKTYTIPAGTYNDDTYLTTIDLRTIYGMNFRRGTISVVEPDGRVEVFEEPEGGWNNDPFLRFNGNTEGRRLVVGFNIPFRYEFSKFLIKQTADDGSTNTEDSGRLQLRRAWVNYENSGAFTIEVENQSRLFSYDMAGGRLGSENLRVGRLNLGTGQYRFPVPGNAKYNTVRIVSDNTTPLNVIGCGWEGNYNRRSSGI
Physico‐chemical
properties
protein length:792 AA
molecular weight: 89269,17030 Da
isoelectric point:5,41627
aromaticity:0,12626
hydropathy:-0,44318

Domains

Domains [InterPro]
IPR058003
TTP
1–792
IPR058003
QOC57670.1
1 792
Architecture
TTP
TTP 1-792
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOC57670.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9935
Central domain 141 349 210 0,3531
C-terminal 350 792 442 0,1470
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-349
C-terminal
350-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEp_SNUABM_04
[NCBI] 		2772016 No lineage information
Host Erwinia pyrifoliae
[NCBI] 		79967 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOC57670.1 [NCBI]
Genbank nucleotide accession
MT822285 [NCBI]
CDS location
range 16764 -> 19142
strand -
CDS
ATGGCCTTAGTAAGTCAAAACGTGAAGAACCTGAAAGGTGGCATCAGCCAGCAGCCAGACATTCTTCGCTTCCCGGAACAGGGAGCAGAACAAATCAATGGTTGGTCCTCTGAAACTGAGGGTCTCCAGAAGCGTCCACCAATGGTGTTCACCAAGACGCTGGGTGGTAAGGGTTCCTTGGGAACATGGCCTTACATTCACCTGATTAACCGTGACGAGAACGAACAGTACTACGCGGCGTTTACCGGGCAGGGAATCCGCGTGTTCGACCTCAGCGGTAAAGAGTACGCTGTGCGAGGTAACTTGGACTACGTGAGGTGTAACAGTCCACGTGATGAGCTGCGCATGGTGACGGTGGCGGACTATACGTTCATCACCAACCGTAACTACGTCTGTAGGTCTGCGGGACAACTCAGTGACAACGGTGCGTTTCGAGCAGACGGTGACGCGTTGATTAACGTGCGCGGTGGGCAGTACGGGCGTACCTTGCAGGTTGCCTTTAATGGAGCGCTGCGGGCATCCTATACGATTCCTGATGGTTCTCAGAAGGAGCACGTAACCAATACGGATGCCCAATGGTTAGCCGAAGAGTTGGCCCGACAGATTCGCGAGAAGACTCCGGGCTGGGAGATTAACGTTGGTCCGGGATTCATCCACATCAAGGCACCCGGAAATGACCATATCTGGGACTTGTGGACCAAGGATGGCTATGCCGACCAGTTAATCAACTCAGTGTCACACTACGTACAGTCGTTCAATAAGTTGCCCTTACAGGCACCCGCTGGTTACTCCGTACAGATTGTGGGTGATACCTCAAAGACGGCTGACCGCTACTACGTGTACTTCGATTGGGAACGTAAAGTGTGGACCGAGAGAAGCGGCTGGAACATCCGGTATACCTTCGATGGGAACACAATGCCTCACGCCTTGGTGCGTACGTCTGACGGTAACTTTGAGTTGCAAACTCTTCCGTGGACCAACCGTAACTCTGGTGATGATGATACGAACCCGTACCCCAGCTTCATCGACTCGACCGTAAACGACATCTTCTTCTTCCGTAATCGCCTTGGCTTCCTGAGTGGTGAGAACATCGTGCTCTCGCGTACCTCTAAGTACTTCTCGTTCTTCCCGCCTTCTGTGGCAAACCTCAGCGACGATGACCCTATCGACGTAGCTGTGAGTCACAACCGCGTGTCAACCTTGAAGTATGCCGTACCGTTTACCGAAGAGTTGCTCTTGTGGTCTGACGAAGCACAGTTCGTGTTGAGTGCGAATGGTATCCTGTCCGCTCGTTCCGTAGAGTTGAACCTGACGACACAGTTCGATGTGCAGGACCGCGCTCGTCCGTATGGTATTGGTCGTAATGTTTACTTTGCGTCTCCTCGCGCTTCCTTCACGTCCATCAACCGTTACTATGCGGTTCAGGATGTGTCCAGCGTTAAGAATGCAGAGGACATGACGGCTCACGTTCCAAGCTACATCCCGAATGGTGTGTTCGACATCCACGGCTCCAGCACGGAGAACTTCGCGTCAATCCTTACGGGAGGCGCTGAGTCCAAGGTGTTTATCTACAAGTTCCTCTATCTGGATGAAGAGATTCGCCAGCAGTCGTGGTCTCATTGGGACTTCGGTGAGGGTGCCCGTGTACTGGCTGCGTCAAGTATTGGCTCGACGATGTTCTTAGTGATTGAGAACGACTTCAACGTCTTTATGGGGTACGTACAGTTTGTGAAGAACACCATTGATATTGCGGGTGAGCCTTACCGCGTGTTCTTGGACGCCAAGAAGACCTACACGATTCCAGCGGGTACATACAACGATGATACCTACCTGACGACAATTGACCTTCGTACCATTTACGGTATGAATTTCCGTCGCGGTACAATCTCCGTGGTAGAACCTGATGGGCGCGTTGAGGTGTTTGAGGAGCCGGAGGGCGGCTGGAACAATGACCCGTTCTTGCGCTTCAACGGTAACACCGAGGGCCGCAGGCTGGTTGTTGGGTTTAACATCCCGTTCCGTTACGAGTTCTCTAAGTTCCTCATTAAGCAGACCGCTGATGATGGCTCGACGAACACAGAGGATAGTGGACGCTTGCAGCTTCGCCGTGCGTGGGTCAACTACGAGAACTCCGGTGCGTTCACCATTGAGGTGGAGAACCAGTCTCGTCTGTTCAGCTATGATATGGCTGGTGGTCGTCTCGGGAGTGAGAACCTCCGAGTGGGCCGCTTGAACCTCGGTACGGGTCAGTATCGTTTCCCTGTGCCCGGTAACGCCAAGTACAACACTGTGCGAATCGTCTCGGACAACACAACGCCTCTGAACGTGATTGGCTGCGGCTGGGAAGGTAACTACAATCGCCGGTCTTCCGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
93bf2a662e0923a1584325ae62e8772c85850626fcf96a9a969ec63f3f077bf6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3058
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of novel Erwinia phage pEp_SNUABM_03 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank