Protein

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Genbank accession
CAB4137377.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLTKVSYSMIDSAPVSVLDFGAVGDGVTDDTAAIQLAINYANQQQTNSTWLTTVTPYTNSKVVDFPSAVYKINGTLLLPASIILNGNNSTLVGTGFTSGDNICIESGYYNGSTIVSNIGTSLNTQRLQYSGIVGFRFTNFKIALNLYNFNEGCYVRDCSFVNCLQNVTSDGMFYSEFVNLFSRGSSGGSTLPAFFFRNAVNAVNLQSVFVTDRELCFLFADGCYGLTLEELSTEASKDGIRFSNEIASVYITGCYFEALTGAAIQFVPIGNSNMENVIIDSCWFYDVVTGIAGSRMIGGKIGSGNTFRVVTNPITIVDNISTILVEIPEIRISSTAVTQFPSLPTGYSLGASLIVDYPVAVFDNATGESKFLQHWPSTNPVPLPFSGSQGFVANTVPFCNVTQGAGSPFDILISTLIAYDSYVAGLFALTIADSLGGYTINGRFFGGNVYTDAAAGKTITVNNNAGYVQLQISSFTGAFTCGGIVRMF
Physico‐chemical
properties
protein length:489 AA
molecular weight: 52221,22870 Da
isoelectric point:4,42522
aromaticity:0,12065
hydropathy:0,28119

Domains

Domains [InterPro]
IPR012334
STR
4–351
IPR012334
IPR011050
STR
15–317
IPR011050 DC_1133
IPR024535
ENZ
16–130
IPR024535
CAB4137377.1
1 489
Architecture
STR
RBD
STR 4-351 | RBD 352-489
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4137377.1
1 489
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,9516
Central domain 31 366 337 0,9879
C-terminal 367 489 122 0,9671
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-30
Central
31-366
C-terminal
367-489

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4137377.1 [NCBI]
Genbank nucleotide accession
LR796335 [NCBI]
CDS location
range 9765 -> 11234
strand -
CDS
ATGTCTCTGACAAAAGTTTCGTATTCGATGATTGACAGTGCGCCAGTGTCCGTGTTGGACTTTGGCGCTGTTGGTGATGGTGTAACCGATGACACAGCGGCCATTCAATTAGCCATCAACTATGCAAATCAACAACAAACAAATAGTACGTGGTTGACAACTGTTACACCATATACAAATTCTAAAGTTGTTGATTTTCCTAGTGCTGTTTATAAAATTAATGGCACTTTGCTGCTGCCAGCATCAATTATTCTTAACGGGAATAACTCAACATTAGTGGGAACTGGATTTACATCTGGTGACAATATCTGCATTGAATCTGGATATTACAACGGCAGCACAATTGTCTCCAACATTGGCACTTCATTAAATACCCAAAGATTACAATATTCTGGCATCGTTGGATTTAGATTTACAAATTTCAAGATTGCCTTGAATTTGTATAATTTTAATGAGGGTTGCTATGTACGCGATTGCTCTTTTGTAAACTGCTTGCAGAACGTAACTTCGGATGGAATGTTCTATTCCGAGTTCGTAAATTTGTTTAGCCGAGGTTCGTCTGGTGGCAGCACGCTTCCGGCTTTCTTTTTTCGCAACGCTGTCAATGCCGTAAACCTCCAATCGGTGTTTGTCACTGATCGCGAACTTTGCTTTCTGTTTGCAGATGGATGTTATGGCCTGACTCTTGAAGAGCTTTCCACAGAGGCAAGCAAAGACGGAATACGATTTTCAAATGAGATTGCCTCAGTTTATATAACAGGATGCTATTTTGAAGCATTGACTGGAGCAGCAATTCAATTTGTTCCTATTGGCAACTCCAATATGGAAAACGTAATTATCGACTCATGTTGGTTCTATGATGTCGTTACAGGCATTGCAGGTAGTCGAATGATTGGCGGAAAAATTGGCAGTGGAAACACGTTTAGGGTTGTCACTAACCCTATTACCATTGTCGATAACATTAGCACAATCTTAGTTGAAATTCCTGAAATTCGTATTTCAAGCACTGCGGTAACACAATTCCCATCTTTGCCAACCGGATACTCTTTAGGCGCGTCACTAATTGTTGATTACCCTGTTGCCGTTTTTGATAACGCAACAGGGGAAAGTAAATTTTTACAACACTGGCCATCTACAAATCCAGTACCTCTGCCTTTTAGCGGAAGCCAAGGATTTGTTGCAAACACTGTACCTTTTTGTAATGTCACGCAAGGAGCTGGCTCTCCTTTTGACATACTCATCAGCACATTAATTGCTTATGATTCGTATGTTGCTGGGTTATTTGCCTTGACTATTGCTGATAGTTTAGGTGGGTACACCATCAACGGTAGATTTTTTGGTGGGAATGTTTATACAGACGCTGCTGCTGGAAAAACCATTACTGTTAACAACAACGCAGGATATGTTCAATTGCAAATTAGTTCCTTTACAGGCGCGTTTACTTGCGGCGGTATTGTAAGAATGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
53f4b6205bd08c4bf27f1ee4c0b66b3546c8603d18ebc22e1c449c62eabca099
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7118
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50