Protein

View in Explore
Genbank accession
WRQ13305.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MAIPSFLNFLEESKQLDEAFNSSPYELTFGKKNAGDIFFTFVDEDEKEFRIQFYTPQGLGKNVRQVFIGQKRGSTYPDAIGRFKNPMRVIASMIEATKQFMATPLGKTIDGFAINFSKKALERGVTLLPKIIRQSGLKQKLNVMDLTYTPIPDRAFVWVVRKGKDPAQVFDGPKMKGVTWDDPDKVGDVPVQNDTQDTNVGATTNNPATWSWRGKIGQPPRINYYQRGTFDLDITPSLSEADVLVGQNGRKQVVEPTVEDICREFGVPVPPSDLLNNFNQRVKDWREINFPTSDANPDWNISVMAKSNGIFSSVVKVVGANDVTLSSNDLAIMVKDGAMAKIARSQSIAQVTVFNKEYVGRGEVDRKIMAASDRQGMGWELKSGGKIVAYVEFGIGATAPVDMKTLPKTGSMDDLRNQGYIARILGIVDTYAPQQVGMYAGEKLARVGAGKYRTSGGLDIQVYFWGIVNGKLSVEVVSDLSGNEQLMLEGDVKNAAFEIVSAISRAADSQFNGEVECRVVPINGAPYPIQKISRSQGYSYVDCGSFTLKIADALLNRFTLGKAVKLDLMKEFPRTTFKVRYDWRGKDTLLVQSSDERTIFGEINTNSSENAVITANIKVPSNAKFFGETVHGFSVAWDFQFPAGSKLQAARFVTNVTYDFDRNKANITTMLTENGRNVVDSNGYDISLSVKSVQDALDEISRRLKDAASQLSHLSSSNYNPNKLFLNDITVSKFGAIMFQDKDLAQSRNRTAVIDALARAKDQAAGGKNAGDLATYAESIRDSAPNGRDLDWQVYTASNGTVLNVAWDITFRRNTTEGAYREFKDQINRANQYLQTVYNDAKSKGYNPTEPNLMTLERARQSDEWAMSNGDSAYSEYEQSLGGNLQISLK
Physico‐chemical
properties
protein length:890 AA
molecular weight: 98546,89840 Da
isoelectric point:7,49544
aromaticity:0,09438
hydropathy:-0,39989

Domains

Domains [InterPro]
DC_0099
STR
1–890
DC_0099
Coil
Unmapped
690–710
Coil
WRQ13305.1
1 890
Architecture
STR
STR 1-890
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WRQ13305.1
1 890
Domain Start End Length (AA) Confidence
N-terminal 1 718 718 0,8058
Central domain 719 879 162 0,7799
C-terminal 880 890 10 0,1356
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-718
Central
719-879
C-terminal
880-890

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenAc-pSK20
[NCBI] 		3093916 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WRQ13305.1 [NCBI]
Genbank nucleotide accession
OR729889 [NCBI]
CDS location
range 78426 -> 81098
strand -
CDS
ATGGCCATCCCATCTTTCTTGAACTTTCTTGAAGAGTCTAAACAATTAGACGAAGCGTTTAACTCATCCCCGTATGAATTGACATTCGGCAAGAAGAACGCTGGTGACATTTTCTTCACATTTGTTGATGAAGACGAAAAAGAATTCCGTATTCAATTCTATACCCCACAAGGTCTAGGCAAGAATGTTCGCCAAGTCTTTATCGGTCAGAAGCGTGGTTCCACATATCCCGATGCCATCGGTCGTTTCAAGAATCCGATGCGTGTTATCGCATCCATGATTGAAGCAACAAAGCAATTCATGGCGACGCCTTTGGGGAAAACCATTGACGGCTTTGCAATTAACTTCTCCAAGAAAGCATTGGAACGTGGTGTTACCCTCCTGCCGAAGATCATCCGTCAGTCCGGCCTGAAGCAGAAGCTCAATGTCATGGACCTGACGTATACCCCTATCCCTGATCGTGCATTCGTATGGGTTGTGCGTAAAGGTAAGGATCCTGCTCAGGTATTCGATGGCCCGAAAATGAAAGGTGTCACATGGGATGATCCAGACAAGGTCGGCGACGTTCCGGTTCAGAACGATACTCAAGACACTAATGTTGGCGCTACTACCAACAATCCCGCAACCTGGTCATGGCGTGGTAAGATCGGTCAGCCTCCTCGCATCAACTATTATCAGCGTGGCACATTTGACTTGGACATTACCCCAAGCCTGAGTGAGGCCGATGTCCTCGTTGGTCAGAACGGTAGAAAGCAGGTGGTAGAACCGACCGTAGAAGATATTTGTCGTGAATTTGGTGTTCCTGTTCCTCCTTCGGATCTGCTCAATAATTTCAACCAACGCGTCAAAGACTGGCGTGAAATTAACTTCCCGACCAGTGATGCCAACCCTGACTGGAACATTTCCGTCATGGCGAAATCCAACGGCATCTTCAGTTCTGTTGTGAAGGTAGTCGGTGCCAACGACGTGACTCTGAGTTCCAATGATCTGGCCATCATGGTCAAAGATGGCGCAATGGCGAAGATTGCCCGCTCCCAATCTATCGCTCAGGTGACCGTATTCAACAAAGAATATGTCGGTCGCGGTGAAGTGGATCGCAAAATCATGGCAGCTTCTGACCGTCAGGGAATGGGATGGGAACTGAAGTCCGGCGGCAAGATTGTGGCATATGTTGAATTTGGAATAGGGGCTACTGCTCCCGTCGACATGAAAACTCTTCCAAAAACCGGTTCTATGGATGATCTGCGCAACCAGGGTTATATCGCCCGCATCTTGGGCATCGTTGATACATATGCTCCTCAGCAAGTCGGCATGTATGCTGGTGAAAAATTGGCTCGGGTTGGTGCTGGCAAATATCGAACTTCTGGCGGGTTGGATATTCAAGTCTATTTTTGGGGGATTGTCAACGGAAAACTTTCTGTAGAAGTGGTTTCTGATTTATCTGGCAATGAACAGCTGATGCTGGAAGGCGACGTGAAAAACGCTGCTTTTGAAATCGTCAGTGCGATATCCCGTGCTGCTGATTCTCAGTTCAACGGTGAAGTGGAATGTCGTGTTGTTCCGATCAACGGTGCCCCATACCCGATTCAAAAAATTTCCCGTTCCCAGGGATATTCTTACGTTGATTGTGGTTCTTTCACATTGAAGATCGCTGACGCTCTGCTGAATCGGTTTACCTTGGGCAAGGCGGTCAAACTTGATCTGATGAAAGAGTTTCCTCGTACAACATTCAAAGTCCGCTATGATTGGCGTGGAAAAGATACTCTGTTGGTTCAATCTTCCGACGAGCGTACTATCTTTGGTGAAATCAACACCAATTCCAGTGAAAATGCAGTGATCACTGCAAACATCAAAGTACCAAGCAACGCTAAATTTTTTGGTGAAACCGTTCATGGCTTCTCTGTAGCGTGGGATTTCCAGTTCCCTGCTGGTAGCAAGTTGCAAGCCGCAAGATTCGTTACCAACGTAACTTACGATTTTGATCGAAACAAAGCCAACATCACCACCATGTTGACTGAAAATGGTCGAAATGTAGTAGACAGCAATGGATATGATATTTCGTTGTCTGTCAAATCAGTGCAAGATGCATTGGATGAGATTTCTAGACGCCTGAAAGACGCAGCGTCGCAACTGAGCCACCTCAGTTCATCAAACTATAACCCTAACAAGCTGTTCCTGAATGACATCACTGTCAGTAAATTTGGCGCAATTATGTTCCAAGACAAAGATTTGGCACAGTCCAGGAACCGCACGGCAGTCATTGATGCTCTGGCTCGGGCTAAAGATCAGGCTGCTGGAGGTAAGAATGCAGGTGATCTGGCCACCTATGCCGAATCCATTCGTGACAGCGCTCCTAATGGACGAGATCTGGATTGGCAGGTATACACAGCCAGTAATGGTACAGTTCTGAATGTTGCCTGGGATATCACTTTCCGTCGCAATACGACCGAAGGAGCATATCGTGAATTCAAGGATCAGATCAACCGTGCCAACCAATACCTGCAAACGGTATACAACGACGCGAAATCTAAAGGCTATAATCCTACCGAGCCAAATCTCATGACTCTTGAACGCGCTCGCCAATCCGACGAATGGGCTATGAGTAATGGTGATAGTGCATACAGTGAATATGAACAATCGCTGGGTGGTAATCTTCAGATTAGTCTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
23eeb08816819415d71e66a0ef784083c07a8bea90540b2d3b3a33b7c2f32dba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella virus vB_SenAc-pSK1 Kim,Y., Park,S.Y. and Kim,J.H. 2012-09-15 — GenBank