Protein

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Genbank accession
WED25136.1 [GenBank]
Protein name
constituent protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPLQLLKYDPGIVKDITEYAAGKNGPFWVDGNLVRFRNGYPTKIGGWQNDGMLGLDPSGTITQNYVTLTGIARKTAFWRAITTGEDYMAIGTHNHLFILENGALYDITPLRDVSNTATTTTEALDATETEIDLASVTGLTATGAVLIDSEIITYTGISTLTLTGCTRGTNGTSAATHADGSAVTQALINPLSTTSGSAVITVTDEAHGALTGDWVAISGAAAIGGITADEINDYYGYQITVLTPNTYTITVPTNATSTVAAGGGNAVTIKYLIGNAAGLGAQSSDPALGWGVGGWGNEAWGNPRSINNADVALDNSSWNLNLWGEDLIATIRGGAIYYWDTSGGIGNRAVLASSIAGAESVPSVARVTTVSFPDRHFIAGGCQAYVADGSGDVDDMLIRWSTQEDFTKFGPTALNTAGDQRLQVGTKIVSMVSAREETIISTDEAIYGMTFVGAPFIFSFRLLATDAGAAGLNTMISIDGNVFWMGKRNFFSYDGIVKELPCPVKYFVFDRMQERYIDKVVVGHNKKFKEITWWYVSNDNTAGTVNPENDSYVTYNYVEGAWSIGTMDRTTWHDSFGVRDNPYAFDPSGYLYNHETGTSADGAAMNCFIETSPREITAEGENLYMVDKIVPNVDMSASTSMDLYLNTRKYPSAPETTKGPFAMTQSTEKVSVRAKGRQISVKFQTTGTQDDWSLGDFRINTRVDGLR
Physico‐chemical
properties
protein length:707 AA
molecular weight: 75966,72450 Da
isoelectric point:4,65531
aromaticity:0,09901
hydropathy:-0,14809

Domains

Domains [InterPro]
DC_0191
STR
1–707
DC_0191
IPR023366
STR
184–270
IPR023366
WED25136.1
1 707
Architecture
STR
STR 1-707
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WED25136.1
1 707
Domain Start End Length (AA) Confidence
N-terminal 1 571 571 0,4294
Central domain 572 696 126 0,1096
C-terminal 697 707 10 0,9967
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-571
Central
572-696
C-terminal
697-707

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-902
[NCBI] 		3032257 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Roseobacter sp.
[NCBI] 		1907202 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WED25136.1 [NCBI]
Genbank nucleotide accession
OQ401624 [NCBI]
CDS location
range 22726 -> 24849
strand -
CDS
ATGCCTTTACAGCTTCTTAAATATGATCCCGGTATTGTCAAAGACATTACAGAATATGCTGCTGGTAAAAATGGCCCATTCTGGGTTGATGGAAATTTAGTTCGCTTTCGCAATGGATACCCTACTAAGATCGGCGGTTGGCAAAACGATGGAATGCTTGGATTAGACCCAAGTGGAACAATCACTCAAAATTATGTGACTCTAACTGGTATTGCCAGAAAGACTGCGTTCTGGAGAGCAATTACTACTGGCGAAGATTACATGGCGATTGGCACACACAATCACCTGTTTATTCTTGAGAATGGCGCTCTTTATGACATTACGCCACTGCGTGACGTGTCTAACACTGCAACCACTACAACAGAAGCGTTGGATGCTACAGAAACAGAAATCGATTTGGCAAGCGTTACTGGATTAACAGCCACTGGAGCCGTTCTAATCGATAGTGAAATCATCACTTATACAGGTATTAGCACACTCACTCTGACAGGCTGCACAAGAGGCACAAATGGAACTTCTGCTGCAACACACGCAGATGGCTCTGCTGTTACTCAGGCTCTTATAAACCCACTGTCAACCACATCTGGAAGCGCAGTCATTACAGTTACAGACGAAGCGCATGGCGCATTGACTGGAGACTGGGTGGCGATCAGTGGAGCTGCTGCAATCGGTGGCATTACGGCTGATGAAATCAATGACTACTATGGCTATCAAATAACAGTCTTAACGCCAAACACTTACACCATAACTGTGCCAACAAACGCAACATCAACAGTCGCAGCAGGCGGTGGCAACGCTGTCACAATCAAATACCTGATCGGCAATGCGGCTGGGCTTGGAGCGCAAAGCTCAGATCCAGCACTTGGTTGGGGCGTTGGCGGCTGGGGTAATGAGGCTTGGGGCAACCCAAGATCCATCAACAACGCAGACGTTGCCCTCGACAATAGCTCATGGAACTTAAACCTATGGGGCGAGGATCTTATTGCCACTATTCGAGGTGGCGCGATTTATTATTGGGATACATCAGGCGGCATTGGCAATCGGGCTGTTTTGGCCTCTTCTATTGCTGGGGCTGAAAGCGTTCCATCTGTGGCGCGTGTTACCACAGTGTCATTCCCAGATCGGCATTTCATTGCTGGTGGCTGTCAGGCTTATGTAGCTGATGGATCAGGCGATGTAGATGACATGCTTATTCGTTGGTCAACTCAGGAAGACTTCACCAAGTTTGGCCCAACTGCGCTAAACACTGCTGGCGATCAGCGTCTGCAAGTTGGTACAAAGATCGTGTCAATGGTTTCAGCGCGTGAAGAAACCATTATATCCACAGATGAAGCCATATACGGCATGACCTTTGTGGGTGCGCCGTTTATCTTCTCATTCCGACTGCTTGCCACAGACGCTGGAGCGGCTGGTCTAAACACAATGATTAGTATCGATGGCAACGTCTTCTGGATGGGAAAACGAAACTTCTTCTCATATGACGGCATTGTAAAAGAGCTGCCATGCCCAGTGAAGTATTTTGTCTTTGATCGAATGCAGGAACGCTACATCGATAAAGTTGTGGTTGGCCACAATAAGAAATTCAAAGAAATCACTTGGTGGTATGTCAGCAACGATAATACGGCAGGCACGGTAAATCCAGAAAATGACAGCTACGTCACATATAACTATGTCGAAGGCGCATGGTCGATTGGCACGATGGATCGCACAACTTGGCATGACAGCTTTGGCGTAAGAGATAATCCATATGCATTTGATCCAAGCGGCTATCTGTACAACCATGAAACAGGCACAAGTGCAGATGGCGCGGCTATGAATTGCTTCATCGAAACGTCACCGCGTGAAATCACGGCTGAAGGTGAAAACCTTTACATGGTGGATAAAATTGTGCCAAACGTAGATATGTCGGCAAGCACGTCTATGGATCTTTATTTAAACACGCGCAAATATCCATCTGCGCCTGAAACAACCAAAGGCCCATTTGCAATGACCCAATCGACAGAAAAGGTCAGTGTGCGCGCAAAAGGTCGGCAGATAAGTGTAAAGTTCCAAACTACAGGAACGCAAGATGATTGGTCATTAGGAGACTTTAGGATCAATACAAGAGTGGACGGTTTGAGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
65921d4f599a839162fde9628b04ce5b6345a3c90922bd4a443f15b141eda77b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8419
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50