Protein

View in Explore
Genbank accession
YP_010749527.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDLYFPRSLKPVVSKGYSMTRRNNVWSVDLAGGGVRQGRDTYYDVFPVSVTLITSAMGRQAFLSFLEKVDGGASSFWMAHDFGMGIEDYQVTITSTIAESTEDGINWTITFTATAEKSPFQDLENQCLINNLPDLYGCYGDCLGSFLKIYANYETTFPRIWSDEGPAGYPPINLLASALDSRIVYEGPQVYYINRNGNLVRSAANEWPLTFIDGVAVGRVPPEGGSINYQIGGLGIGWVSSFNRIPLTSTEDSVYQGNLAGAVTPTTENNSHFLYAKSLGDSVIDVGETYTATVILKANGVQFIQVYWNAGSTGISSHYSNFDLINKAVSGTATSAFITEISDGWVLCSTTTIATGDGSSLSSISVASIPSMASTRLPSYASDGESSFSVASAQVEKNPFATSPIVTDASPSARQTASAKVVMSGAASIDITYSDGTVVNVPSVDDYATIPQADSAWGSKYITRIDFNVDG
Physico‐chemical
properties
protein length:472 AA
molecular weight: 50501,49060 Da
isoelectric point:4,44080
aromaticity:0,10805
hydropathy:-0,04068

Domains

Domains [InterPro]
DC_0353
STR
48–472
DC_0353
NF048003
Unmapped
260–416
NF048003
YP_010749527.1
1 472
Architecture
STR
STR 48-472
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-phiEc3
[NCBI] 		2863832 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010749527.1 [NCBI]
Genbank nucleotide accession
NC_073323.1 [NCBI]
CDS location
range 17198 -> 18616
strand +
CDS
ATGAGCGACTTATACTTTCCACGTAGCCTTAAGCCGGTGGTATCAAAAGGCTACTCAATGACCAGACGTAACAACGTCTGGAGTGTAGATTTAGCCGGTGGCGGGGTGCGTCAGGGCCGTGACACGTATTACGACGTGTTCCCTGTTAGCGTAACCCTGATTACATCCGCAATGGGGCGGCAGGCGTTTCTGTCGTTCCTCGAGAAAGTCGATGGTGGCGCGTCAAGTTTCTGGATGGCGCACGACTTCGGCATGGGTATTGAGGATTATCAGGTAACCATCACGTCCACTATAGCGGAGTCCACCGAAGACGGGATTAACTGGACAATTACCTTCACGGCAACCGCCGAGAAATCGCCGTTCCAGGACCTTGAGAACCAGTGTCTGATTAACAATCTGCCAGATTTGTATGGCTGTTATGGTGATTGCCTGGGCAGTTTCCTGAAAATATACGCGAACTATGAAACGACGTTCCCGCGTATCTGGAGTGACGAAGGCCCCGCCGGTTATCCGCCGATTAACCTTCTGGCGTCCGCGCTGGATAGCCGCATTGTTTATGAGGGGCCACAGGTTTACTACATCAACCGAAATGGCAATCTTGTGCGGTCAGCCGCCAATGAATGGCCTCTTACGTTTATCGATGGGGTTGCGGTTGGGCGTGTGCCGCCAGAAGGCGGTTCTATTAACTACCAGATAGGTGGATTAGGTATTGGGTGGGTAAGTAGTTTCAACCGTATACCCCTAACATCAACAGAGGACAGTGTATACCAAGGCAACCTGGCGGGCGCAGTCACCCCAACAACAGAAAATAACAGCCATTTCTTGTATGCCAAATCGCTAGGGGATTCAGTAATAGATGTTGGGGAAACATATACTGCTACGGTAATTCTTAAGGCGAATGGTGTCCAGTTTATTCAGGTTTATTGGAACGCAGGTAGCACAGGGATTTCATCGCACTACTCTAACTTCGACCTTATTAATAAAGCTGTATCAGGCACGGCGACATCGGCTTTCATAACTGAAATATCCGATGGGTGGGTTCTATGCTCAACTACCACAATCGCGACGGGGGACGGTTCTTCGCTATCCTCCATATCGGTGGCAAGCATACCGTCTATGGCGTCTACCAGACTCCCGTCTTACGCATCGGATGGAGAATCTTCTTTTTCAGTTGCGTCCGCTCAGGTTGAAAAAAACCCATTCGCCACGTCACCAATAGTAACTGACGCATCACCATCCGCACGCCAAACGGCGTCAGCAAAGGTAGTAATGAGCGGAGCCGCAAGTATTGACATCACCTATTCCGACGGCACTGTGGTAAACGTTCCGTCTGTAGATGATTACGCGACTATCCCTCAGGCCGATTCTGCGTGGGGTAGTAAATATATCACTCGTATTGATTTTAATGTGGACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b449179dfd7de419e736c1ee5cf9bef32535c57ef22abda7a5faa5902ad55730
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8022
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two Escherichia phages belonging to the genus Kagunavirus Rodea Montealegre,G.E., Gonzalez-Villalobos,E., Balcazar,J.L. and Molina-Lopez,J. 2016 — GenBank