Protein

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Genbank accession
AUR83935.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSGVLPRNGGGGAGFELGPAQNVFTGADRTAAELERDTYTVANPSWLAEYEVATGVKPNIRLEFSDNGEPSVVHQVRNSAGTAWSDNESVVAIKGDPGDSDISNVDDGQIPVREGSILVSSGMQKLPSGQILAPKNFGVESASIDFGDVITVSEQSSFLGIRDNSNGQSYILVDFERNRDEPSRSPRIFTSTEAETPEVVQSDDSTELTGTSLTFDYTTTLTAYTNAITLRAQSEMTNVRIKITPQGSEVGLKYIPQKSSWISETEGLTLTAGDNEIDLFDSSLALESGTTLTVEIRADAISLLGTATGIPYLAVKKQDARFNSLVVQGEPVGALGGDTLTVLPNTSISASFSDPVTTETTTLNLDDGNYSGDTIEFVFANNLGTNTVVFNASSDIGFFDTNSNTFVFSPQLTLTGRSARVVFEWYGNDWRIIR
Physico‐chemical
properties
protein length:434 AA
molecular weight: 46461,47100 Da
isoelectric point:4,24749
aromaticity:0,07834
hydropathy:-0,23664

Domains

Domains [InterPro]
DC_1057
STR
8–434
DC_1057
AUR83935.1
1 434
Architecture
STR
STR 8-434
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR83935.1
1 434
Domain Start End Length (AA) Confidence
N-terminal 1 215 215 0,8829
Central domain 216 414 200 0,0447
C-terminal 415 434 19 0,6841
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-215
Central
216-414
C-terminal
415-434

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.046.O._10N.286.52.E3
[NCBI] 		1881423 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR83935.1 [NCBI]
Genbank nucleotide accession
MG592428 [NCBI]
CDS location
range 6539 -> 7843
strand +
CDS
ATGTCTGGAGTATTACCGAGAAACGGCGGAGGTGGCGCAGGGTTTGAACTCGGACCCGCACAGAATGTTTTCACCGGTGCGGATAGAACAGCCGCTGAACTAGAGCGAGACACTTACACGGTCGCGAATCCGTCATGGCTTGCGGAGTATGAAGTCGCAACAGGCGTTAAGCCTAACATCCGATTAGAGTTTTCGGATAACGGGGAACCCTCTGTCGTCCACCAAGTGCGAAACAGTGCCGGAACCGCGTGGTCGGATAACGAATCTGTTGTTGCCATTAAAGGCGACCCTGGCGACTCCGACATTAGCAACGTTGACGACGGTCAAATCCCCGTCCGTGAGGGTTCGATTCTGGTTTCGTCTGGTATGCAAAAACTACCGAGCGGTCAGATTCTAGCGCCTAAGAATTTTGGTGTTGAGTCTGCATCAATTGACTTTGGTGACGTAATCACGGTGTCTGAGCAAAGTTCTTTCTTGGGTATTAGAGATAACTCAAACGGTCAAAGCTACATACTTGTGGACTTTGAGAGAAACCGTGATGAGCCGTCTCGAAGCCCTCGTATATTTACATCAACAGAAGCTGAGACGCCCGAGGTTGTGCAGTCTGATGACTCAACAGAGTTAACTGGTACGTCGCTAACATTCGACTACACCACCACCCTTACAGCCTACACGAACGCAATTACACTTCGAGCTCAGTCAGAGATGACCAACGTTCGGATTAAAATTACGCCACAAGGCAGTGAGGTAGGTTTAAAATACATCCCACAAAAGTCATCATGGATATCAGAAACTGAAGGCTTAACGCTAACCGCTGGCGATAATGAGATCGACTTGTTTGACTCATCACTTGCTTTAGAGTCTGGAACTACGTTAACTGTAGAAATTCGAGCTGATGCAATCTCGCTGCTTGGTACGGCGACTGGCATTCCATATCTAGCCGTTAAGAAGCAGGACGCGAGGTTTAATTCGCTAGTCGTACAGGGGGAACCCGTCGGCGCTCTAGGTGGCGACACGCTAACCGTCTTACCGAATACGAGCATTAGTGCGTCATTCTCGGACCCTGTAACGACAGAGACGACCACGTTAAATCTGGACGACGGTAATTATTCGGGCGATACGATCGAGTTTGTGTTTGCGAATAACCTAGGTACCAACACGGTGGTATTCAATGCTAGTTCAGATATTGGGTTCTTCGACACGAACAGTAACACGTTTGTGTTCTCGCCACAGTTAACGCTTACGGGGCGTTCTGCGAGGGTTGTGTTTGAATGGTACGGTAACGATTGGAGAATTATACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d8adccd8d7f16628faefc40cc7767cdce181fa4a3b7de03d24de6f01bfe2d683
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5865
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank