Protein

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Genbank accession
CAM0067283.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSARFIRYTLDGIKLTHDIGFGVTDGDGFDVYINRTKLDKNLDYDVIGSVEELRKGNGKITLKAAHAASDVLLILSDTLARRVTNFAKAARFEEAEIDNEFDNLLRLLEDAALNLQSTPYFDPTDVGLVDGKLPPIIANGVLRINASGNGFELILLDELPELQEIIRKATAQADRSESEANKSQASASEAKSIAESIGANPIGNYKGLWPDVGGSAKKEETWQIQVNGQQTGLYFTALKDTAVNPVGDNVNWRAIIGGTSLSQYTDIAYKTSGGRSSVENMVAGIPVAAKVGDICGNKGMQWERVSVSNPSSLDDFRPLMPVTPSAWGLNEAGFNNADAIQSALEYCHDNNVSFIAPTVDADTDKTIFLPNFPSFNTQQTIDFAGMRIRPDDTVFKPMQSGKRVGGVWSSAMSEPLQTYRTFNTKLTGLMFVRDDPETKDGRVALELKDWHQSCELETLTARNFQTALDSYNNFYLNYGNLKLQNAALSSGKRTGIGFIFRTANNLNNIKQLVSQNVDQGYIFEGLVTALHIESISLEGQNHGLATTGEVRGMTVSGTYGEYNNSDSEDFFDFQSSVYNVDIDGCYFTSNNPNTWIIKSKSSPRSAINFGKNNNLAGTLDESRIFENKGYGYRTIGRPSESQGSSLSNLDISESDVGIGTVVEGYCPNIGSGEKTHNIALLNGGTIPSHQSGRMTSGFQTSVMHGLYDPVKGSGQVAFKSKITYSNTQEILLAFKIADINKTVTIRGRMVANQFYEYTSAGLVRSASVTMSAATGFIIFTVTGGLSGSALKVLGAEARVI
Physico‐chemical
properties
protein length:800 AA
molecular weight: 86855,04590 Da
isoelectric point:5,16197
aromaticity:0,08625
hydropathy:-0,27975

Domains

Domains [InterPro]
DC_0090
STR
1–797
DC_0090
Coil
Unmapped
159–186
Coil IPR011050
CAM0067283.1
1 800
Architecture
STR
STR 1-797 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0067283.1
1 800
Domain Start End Length (AA) Confidence
N-terminal 1 334 334 0,9922
Central domain 335 636 303 0,9752
C-terminal 637 800 163 0,9061
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-334
Central
335-636
C-terminal
637-800

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D447
[NCBI] 		3105213 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0067283.1 [NCBI]
Genbank nucleotide accession
OZ196554.1 [NCBI]
CDS location
range 14815 -> 17217
strand +
CDS
ATGTCAGCACGATTTATACGATACACGTTAGACGGCATTAAGCTAACTCATGACATCGGGTTTGGCGTGACAGATGGTGATGGATTTGATGTTTATATCAATCGAACAAAGCTAGATAAGAACTTGGATTACGATGTAATCGGGAGCGTGGAAGAGCTGCGAAAGGGTAACGGAAAAATTACACTGAAAGCGGCGCACGCAGCGTCAGACGTATTGCTAATCTTGTCTGATACATTGGCGCGCCGTGTGACCAACTTTGCGAAAGCTGCGCGCTTTGAAGAGGCAGAGATCGACAATGAGTTCGATAACCTTTTGCGCCTACTGGAAGACGCAGCACTAAACCTACAATCAACGCCATACTTCGATCCAACAGATGTTGGATTGGTGGATGGCAAGTTGCCGCCAATCATTGCAAATGGAGTGCTGCGAATAAATGCCAGTGGTAATGGATTTGAATTGATTCTGCTTGATGAGTTGCCAGAGCTGCAAGAGATAATCAGAAAAGCAACCGCACAGGCCGATAGGTCGGAAAGTGAGGCGAACAAATCACAAGCCAGCGCAAGCGAGGCAAAAAGCATAGCTGAATCAATTGGAGCTAATCCAATCGGGAATTATAAAGGGTTGTGGCCTGATGTTGGCGGGAGCGCAAAAAAAGAAGAAACATGGCAGATTCAGGTGAATGGACAACAAACAGGGCTGTACTTTACAGCGCTAAAGGATACAGCCGTAAACCCTGTTGGAGATAATGTTAACTGGAGAGCAATAATTGGCGGCACTAGCCTGTCGCAGTACACAGATATAGCATACAAAACATCAGGGGGGCGTTCATCGGTTGAAAATATGGTGGCAGGAATCCCAGTGGCCGCTAAGGTTGGTGATATTTGCGGGAACAAAGGTATGCAGTGGGAAAGGGTGTCGGTATCAAACCCAAGTTCGCTTGATGACTTTAGGCCGTTAATGCCTGTAACGCCGTCAGCTTGGGGGTTGAATGAGGCGGGGTTTAATAACGCTGATGCTATCCAGTCAGCCCTTGAGTATTGTCATGATAATAACGTGTCATTTATTGCGCCAACCGTTGATGCGGATACGGACAAAACAATATTTCTGCCTAACTTCCCGTCATTTAATACACAGCAAACAATTGATTTTGCAGGGATGCGAATTAGGCCTGATGACACTGTTTTTAAGCCAATGCAGTCGGGAAAAAGAGTTGGGGGTGTGTGGTCAAGCGCGATGAGTGAGCCGCTTCAAACATACAGGACGTTTAACACTAAGCTTACTGGGCTGATGTTCGTGCGTGACGATCCAGAAACAAAGGACGGGCGTGTGGCTTTGGAGTTAAAAGACTGGCATCAATCGTGTGAGCTTGAAACGTTGACGGCCAGAAACTTCCAGACGGCTTTGGATAGTTACAATAACTTTTATCTCAACTACGGAAATTTGAAGTTACAAAACGCCGCTCTATCGTCAGGAAAGAGAACTGGCATAGGGTTTATATTTAGAACAGCAAATAACCTAAACAACATCAAGCAGTTGGTATCCCAAAACGTTGATCAGGGTTATATATTTGAGGGGCTTGTTACTGCCCTGCATATAGAATCGATCTCTCTTGAGGGGCAAAATCATGGATTGGCGACGACTGGCGAAGTTCGCGGCATGACCGTTAGCGGTACTTATGGTGAATATAACAACTCAGACAGTGAGGATTTTTTTGATTTCCAAAGCTCGGTATACAACGTTGATATAGACGGGTGTTACTTTACATCAAACAATCCAAATACGTGGATTATTAAATCTAAATCATCCCCAAGATCTGCAATTAATTTTGGTAAGAATAACAATCTAGCTGGGACGCTGGACGAGTCGAGAATTTTTGAAAATAAAGGGTACGGGTACAGAACGATAGGCCGTCCATCGGAGTCGCAAGGTTCAAGTCTTTCAAACTTGGACATATCGGAATCGGACGTTGGTATAGGAACTGTTGTTGAGGGGTATTGCCCGAACATTGGTAGTGGAGAGAAAACCCACAACATTGCATTGCTTAACGGCGGGACGATTCCGTCACACCAGTCTGGAAGAATGACATCCGGCTTTCAAACATCAGTTATGCATGGACTTTACGATCCTGTAAAGGGTAGTGGGCAAGTGGCCTTTAAATCAAAAATTACATACAGCAACACTCAAGAAATATTACTGGCGTTCAAAATAGCAGATATTAATAAAACCGTAACCATTAGAGGGAGAATGGTTGCCAATCAATTTTACGAGTACACATCGGCGGGGCTTGTCCGGTCAGCCAGTGTAACAATGAGCGCGGCGACTGGTTTTATTATATTTACCGTTACTGGTGGCCTTTCGGGTTCAGCCCTAAAAGTGCTAGGTGCAGAGGCGCGGGTCATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c442661b9e5d90989535ff0361beb7ee2b93280f7466c0df94be7db093f6503f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3056
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50