Protein

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Genbank accession
AUR86093.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPTSQILTDAEIEHQQYLIRYSQGKANTIKPFLRDIVAYLEARLAREGESIASKKKLNALLKDTQKKMSTIYTDWEKSEFNPMFREVVKSELEFQKGATDAVVAGYNSAVPAQKQVLSAALNSPLLVGAKGGAVDFSKYTKGWRQQEIERVNSRIIAGFYSGETTSQITRGIVGLRSQNYANGILNMSRANIQSMVKTTATHLSMEAQSEFNKENSYLIIGMQWLSTLDSNTSDVCRGRDGEIYYFSEYGQNYPKPPAHPNACLKGTMITTDKGLVAIEDIKVGDNVLTHTGRYMPVTTVMARKHTEGARTLIDNFGRSVSLTDEHPILTLADGWKVTSNVKVGDVLFNNSKEFIQVDDSRSSKVTNAVLLDSHNIVTEATKELVSYGIFSHSAGVSSAVNLDNGVTDNKVCNIDFTNDKLKLVIDSGRIEGVNNDTLMLGGLILEVNSKSVSYLDFSVPVVGGVVSLHSLAGFFRASLVRFGIGSAPVGITSRFWGELLAGVNGVLAASGFNSKLDASLSDSVIREIVFSLNESKAFAINPVLSVNKIDNSFIADHDCAPNDLWFNSTITSIVEYHIDEYVYNISVAEDETYIADGVLVHNCRSTMTPVLSPEYDFLTESRTRPAVSDGKAQEVPGKTTYYEWLNRQPKRVVDEALGPEKSKIFRNAGLTPEEYKKAATDQFGNALNIERMTKKNKDIELYLRKQQQ
Physico‐chemical
properties
protein length:708 AA
molecular weight: 78156,36870 Da
isoelectric point:6,03621
aromaticity:0,08192
hydropathy:-0,27006

Domains

Domains [InterPro]
DC_1147
ATT
1–150
DC_1147 G3DSA:2.170.16.10 IPR006142 G3DSA:2.170.16.10
G3DSA:2.170.16.10
RBD
261–387
G3DSA:2.170.16.10 DC_0892
IPR003587
STR
261–351
IPR003587 cd00081
IPR006141
STR
262–330
IPR006141 IPR003586
cd00081
RBD
263–392
cd00081 IPR006142 IPR006142
IPR028992
Unmapped
264–306
IPR028992 IPR006142 IPR030934
IPR036844
STR
265–603
IPR036844
AUR86093.1
1 708
Architecture
ATT
STR
RBD
ATT 1-150 | STR 261-608 | RBD 609-707 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR86093.1
1 708
Domain Start End Length (AA) Confidence
N-terminal 1 272 272 0,9527
Central domain 273 564 293 0,3777
C-terminal 565 708 143 0,4670
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-272
Central
273-564
C-terminal
565-708

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.082.O._10N.261.49.E4
[NCBI] 		1881192 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR86093.1 [NCBI]
Genbank nucleotide accession
MG592457 [NCBI]
CDS location
range 3148 -> 5274
strand +
CDS
ATGCCGACTAGCCAAATCTTAACAGACGCAGAAATAGAGCATCAGCAATACTTAATCCGTTATTCACAAGGGAAGGCGAACACAATCAAACCTTTCCTTCGTGATATTGTTGCGTACCTAGAGGCACGACTCGCTAGGGAGGGCGAATCCATTGCCTCTAAGAAGAAACTCAATGCGCTACTGAAAGACACTCAGAAAAAGATGAGCACCATTTACACGGATTGGGAGAAGTCAGAGTTTAACCCAATGTTTCGCGAGGTGGTTAAGTCAGAGCTAGAGTTTCAGAAAGGCGCGACTGATGCGGTAGTTGCTGGGTATAACTCAGCAGTACCAGCGCAAAAGCAAGTATTGAGTGCAGCTTTAAACTCTCCACTGCTTGTTGGGGCTAAGGGTGGCGCTGTTGATTTCTCTAAGTATACGAAAGGATGGAGGCAGCAAGAGATTGAGCGCGTAAACTCTCGAATCATTGCTGGCTTTTATTCCGGAGAAACTACCAGCCAGATAACTAGAGGCATTGTCGGATTAAGGTCTCAGAACTATGCTAACGGCATTTTAAACATGTCTAGGGCTAACATACAGAGCATGGTCAAAACAACGGCTACGCACCTGTCTATGGAGGCTCAGTCCGAGTTTAACAAAGAGAACAGCTATTTAATTATCGGTATGCAGTGGCTATCAACTCTTGATTCTAATACGTCTGATGTTTGCAGGGGTCGAGACGGTGAGATTTATTACTTTAGCGAGTACGGTCAGAATTACCCTAAGCCACCTGCCCACCCTAACGCTTGCTTGAAAGGAACTATGATTACAACTGATAAAGGATTGGTTGCGATTGAGGATATTAAGGTCGGTGATAATGTGCTGACTCACACTGGCAGATACATGCCTGTAACTACCGTAATGGCGAGAAAGCACACAGAAGGAGCGAGAACTCTAATAGATAACTTCGGTCGCAGTGTCAGCCTCACGGACGAGCACCCGATACTCACGCTTGCGGATGGGTGGAAAGTTACTAGTAATGTTAAGGTTGGTGACGTACTGTTCAATAACTCTAAAGAGTTTATTCAGGTTGATGACTCCAGATCCTCTAAGGTCACAAACGCAGTCTTGCTTGACTCGCACAACATTGTAACCGAGGCCACAAAGGAACTTGTCTCTTATGGCATCTTTAGCCATTCTGCTGGCGTGTCCTCTGCCGTCAATCTCGATAATGGTGTCACCGATAACAAAGTCTGCAATATAGATTTCACCAACGACAAGCTGAAACTCGTAATCGACTCCGGCAGAATTGAGGGCGTCAATAACGATACTCTCATGCTTGGTGGGCTTATCCTTGAGGTTAATAGCAAGTCTGTTAGTTATCTTGACTTTAGTGTCCCAGTCGTGGGAGGGGTTGTTAGCCTTCATTCTCTTGCTGGATTCTTCCGAGCATCGCTTGTGCGCTTCGGGATTGGTTCTGCTCCAGTGGGAATCACCAGTAGGTTTTGGGGTGAACTTCTTGCTGGAGTTAATGGAGTCCTTGCGGCTTCTGGTTTCAATTCCAAGCTTGATGCATCGCTTTCTGATAGTGTCATTAGAGAGATTGTTTTCTCTCTCAATGAGTCTAAGGCTTTTGCCATTAATCCAGTGCTCAGTGTTAACAAGATCGATAACTCTTTCATCGCTGATCATGATTGCGCTCCTAATGATTTGTGGTTTAACTCTACTATCACTTCAATTGTAGAATATCACATAGATGAATACGTGTACAACATCTCAGTTGCAGAAGATGAAACATACATAGCTGATGGTGTGCTTGTTCATAACTGTCGTAGCACGATGACACCGGTATTATCACCTGAGTATGATTTCCTCACAGAATCTCGAACACGCCCGGCTGTTAGCGATGGAAAGGCGCAAGAGGTGCCGGGCAAGACAACATATTATGAATGGCTAAATAGACAACCAAAGCGAGTTGTTGATGAGGCCCTAGGTCCAGAGAAAAGCAAGATATTCAGAAATGCTGGATTGACTCCAGAGGAATACAAGAAGGCTGCGACTGACCAGTTCGGAAACGCGCTAAACATTGAGCGAATGACAAAAAAGAACAAGGATATAGAGCTATACTTGCGAAAACAGCAACAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
36ae786b0c3f37c96deb70ecaab870fcb22eb48aee80f1d6835dae1cb9f2e497
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6466
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank