Protein

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Genbank accession
APQ42489.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MVNVSIDVTDLGGEARPGDKVVLWKPAAAGSATHAGRVISTAPVDVFLTNGKATVPDVEPGSMRVLLQCRGVESQGPIPVIVPDGTGTVTLRSLIESQFEYSPPIVSAVQEAADNAAASERAAIQAQVRSEAAADRAETRVDEAINNGAALVRNEVKQDADRAVAAKNGAQAAQAAAELARDGAQTAASSTVADIHSELDGLVVAADGHASRAESAATTAAGETVTLVRSEFQGMLAGAESARDAAGVSESNALQSENDAAGYADLAEQSKTAAELAKNDAAQSKADAAISASSANSDAAAAAASASSAAQSESSAATHAQNALTYAGQSESARDESRIARDEAVTAAENAQQGAPSDGWKKHELSQSVQDSLSRADTALQSMPVATEQAPGAIRLTGDLGGTAQAPTVPGLAGKADSVHTHTTEQVDGLDAALARLSNIRAWFKGAGAPPASIPGAQVGDWWLDTDAMELHEITGV
Physico‐chemical
properties
protein length:477 AA
molecular weight: 48208,04590 Da
isoelectric point:4,53316
aromaticity:0,02516
hydropathy:-0,21845

Domains

Domains [InterPro]
DC_1669
ATT
14–234
DC_1669 DC_1656
APQ42489.1
1 477
Architecture
ATT
STR
ATT 14-234 | STR 266-440 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage PMP-GADVASU-IND
[NCBI] 		1927015 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APQ42489.1 [NCBI]
Genbank nucleotide accession
KY203335 [NCBI]
CDS location
range 35378 -> 36811
strand +
CDS
ATGGTTAACGTATCGATTGACGTTACAGATCTCGGGGGTGAGGCACGCCCTGGGGATAAAGTTGTTTTGTGGAAGCCTGCGGCGGCGGGTTCTGCGACTCATGCGGGGCGTGTGATTTCTACCGCGCCGGTGGACGTGTTTCTTACTAATGGTAAAGCTACGGTTCCTGATGTGGAGCCGGGGTCAATGCGTGTGCTTTTGCAGTGTCGTGGTGTGGAGTCGCAGGGGCCGATTCCGGTGATTGTTCCTGACGGCACTGGCACGGTGACGCTGCGGTCCTTGATTGAGTCACAGTTTGAGTATTCGCCACCTATTGTTTCTGCGGTGCAGGAGGCTGCGGATAATGCTGCTGCTTCTGAGCGTGCGGCGATTCAGGCGCAGGTTCGTTCGGAGGCTGCGGCGGACCGTGCGGAGACGCGCGTGGATGAGGCGATTAATAATGGCGCGGCGCTTGTTCGTAATGAGGTTAAGCAGGACGCGGATCGTGCTGTAGCTGCTAAGAATGGCGCTCAGGCTGCGCAGGCGGCGGCTGAGTTGGCGCGGGATGGTGCGCAAACTGCGGCTAGTAGCACTGTTGCTGATATTCATTCTGAGCTTGATGGTCTTGTTGTGGCGGCGGATGGTCATGCTTCGCGTGCTGAGTCTGCGGCTACTACTGCGGCGGGTGAGACTGTCACACTAGTGCGTTCCGAGTTTCAGGGGATGCTGGCTGGTGCGGAGTCTGCGCGTGACGCTGCTGGCGTGTCCGAGTCTAACGCGCTACAGTCTGAGAATGATGCGGCTGGCTATGCGGATCTTGCGGAGCAATCCAAGACTGCGGCTGAGCTAGCTAAGAATGACGCTGCGCAGTCTAAAGCGGATGCTGCCATATCTGCTTCGTCTGCCAATAGTGATGCGGCTGCTGCGGCGGCTTCGGCTTCTAGCGCGGCGCAGTCTGAGTCTAGTGCCGCTACCCATGCGCAGAATGCTTTAACGTATGCGGGACAGTCGGAGTCTGCGCGTGATGAGTCGCGTATTGCGCGTGATGAGGCGGTGACTGCGGCAGAGAACGCACAGCAGGGGGCGCCGTCTGACGGCTGGAAAAAGCATGAGCTTTCACAAAGTGTGCAGGATTCTTTGTCGCGTGCGGATACTGCGCTGCAATCCATGCCGGTTGCTACGGAGCAGGCCCCTGGTGCTATTCGATTAACTGGTGATTTGGGCGGTACGGCACAAGCCCCTACGGTTCCGGGTTTGGCGGGTAAGGCTGATTCGGTGCACACGCACACCACGGAGCAGGTAGATGGTCTGGACGCGGCGCTCGCACGGCTTAGCAATATCCGCGCCTGGTTTAAGGGCGCTGGCGCACCGCCTGCATCTATTCCAGGCGCACAAGTCGGCGACTGGTGGCTAGACACAGACGCGATGGAACTACACGAGATCACGGGGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5f12203b6a4641ad3866bafb2a492aa9940874f7b82314a62e30b2fe5053373
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7092
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of lytic Pasteurella multocida Phage PMP-GADVASU-IND Qureshi,S., Saxena,H.M., Yan,X., Kashoo,Z.A. and Donovan,D.M. 2018-07-17 — GenBank