Protein

View in Explore

Genbank accession

WCO82119.1 [GenBank]

Protein name

central tail fiber J

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,57

Evidence RBPdetect2

Probability 0,96

Protein sequence

MIDYEIQGSKGGSSKPHTPVETPNNLLSVAYAKVLLAVAEGELAGQPTDRDIYLDGTPLQNEDGSYNFGGVKWEWRSGSQDQEAIEEFPEVSTEYSVGIELKDNVQWTRAVTKSQLTDLRVTFQWPALMEQASNGDTNGYKMQYAIDLSTDGGAFQEYQVYTIDGKTNTSYERTHKVKLPKQGSSWTIRARRVTPESSSSTIQDTINVKSYAEVVAVKQRYPNTALLYVEFDSRLFGTGNIPKISVRTKGRVIQVPSNYNPETRNYTGIWDGSFKWAWTNNPAWVFYDLLTQDRFGLGHKVTPVMVDKLALYEIAQYCDVMVDDGTGSGTMEPRHTCNIFIQDKAGAWKVLRDIAGIFNGMTYWDGNKFVAVTDKWEPITNAPMFSRSNVVNGNFDYQAADDKSIYTSALVSYDDPDNHYNTDVEPTFETSQIVRWGGDRQVEITAIGCTSRGEAQRKGKYTLITNLYNRTVSFQTGLQGLSADVLPGKLIHVLDPLLGGRPYTGRIKASAGTVITLDRDVTAVAGDILYLTMEDGSSEGRTVVSATNNIVTVSVNYSKPIPRNSVWYLEASDLKSQLFRVTKVTNPSANVYEIEGVEYNESKYDAIDNGARLEPRPVSVVPPGQQQAPTNLVVSSSTYIEQTMAVTSLVATWDQMPNAVQYEVQWRYNDGDWISAGITGSPTITIKGIYTGDYIVRVRAINAIGVKSVWTTSVSTRLDGKTGGVPALAYLTTTPIVYGIRLNWGFPDGAGDTARTEIMYSTNPNFADAIKLGDYSYPTDMHEMHGLKAGQQFWFWGRLVDRTGNIGPWKPLESENGVHGVSSTDQSEYEEYFKEQITESSLYKELNDRIDLIDGFGPGSVNERVETVNDRVDEANTRIDQTNTDLDNAVADLESQIANITDAMVYDPTKTYVTGDIVRVGNKLFQAIQDVPINTTPPNLTYWEDVGSILQDANAVVTQVDINTQKIAEVDGKITATGEQINGLQAMWRDDDGEGALNDAIDGWGSAAKYAQETKVRASEDEALSQRITSLSATVDTNKASITTMEVAFADTKSANASRMDSIQSQVSGNSASIYELSKTVASNDKVSTEKINTMQSSIDGNTSKITSLETTVTTLETTTASSLELVNSRVDDTQASVGTEATTRANADAALSLRVDTTESSIADNTASIQQVEEAQTSLTESVTRLSTNVSSGWSAVRDDDDDGSLQEALGGAQAAANYGLEVRTRTDADTAMTTRIETLTAAMGVNTAAISNEATVRANADSALSTSISNVQAATNSNTAAIQTVSSAQTTTDGKLNAMWAVKAQVTSQGQYVAAGFGLGIENGPAGLQSQFLVQADKFAVVNGTNATLTAPFVVTGGQVFMNEALITKAMITNAIIGSTITSSVQTNWGGPIMTMDFTNGSVTTRHPTMANTYTLMDRDGIKVYVSGVLRVRMGTW

Physico‐chemical properties

protein length:	1439 AA
molecular weight:	156585,75080 Da
isoelectric point:	4,65417
aromaticity:	0,07922
hydropathy:	-0,35559

Domains

Domains [InterPro]

IPR053171
Unmapped
5–1183

IPR053171 DC_0515

DC_0129
STR
6–931

DC_0129 DC_2230 IPR015406

IPR055385
ATT
91–215

IPR055385 IPR013783 Coil DC_2230

IPR036116
STR
628–715

IPR036116 DC_2230

IPR003961
STR
628–717

IPR003961

IPR003961
STR
628–721

IPR003961

WCO82119.1

1 1439

Architecture

STR

ATT

STR

RBD

STR 6-90 | ATT 91-215 | STR 216-1203 | RBD 1204-1439

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	5	1183	InterPro	Viral Tip Attachment Protein	-	-	-	-
DC_0129	STR	DC_0129	6	931	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR055385	ATT	DC_0360	91	215	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR013783	STR	IPR013783	627	720	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR036116	STR	IPR036116	628	715	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR003961	STR	DC_0003	628	717	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	628	721	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
Coil	Unmapped	-	865	903	Coils	Coil	-	-	-	-
DC_2230	STR	DC_2230	899	1076	Novel HMM	DC_2230	Central	Low	Positional only	32 proteins / 32 hits
DC_2230	STR	DC_2230	1068	1149	Novel HMM	DC_2230	Central	Low	Positional only	32 proteins / 32 hits
DC_2230	STR	DC_2230	1127	1203	Novel HMM	DC_2230	Central	Low	Positional only	32 proteins / 32 hits
DC_0515	RBD	DC_0515	1199	1439	Novel HMM	DC_0515	C-terminal	Low	Positional only	63 proteins / 63 hits
IPR015406	RBD	DC_0135	1283	1416	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pseudomonas phage vB_PpS_SYP [NCBI]	3020390	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Pseudomonas plecoglossicida [NCBI]	70775	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Genbank protein accession

WCO82119.1 [NCBI]

Genbank nucleotide accession

OQ183418.1 [NCBI]

CDS location

range 57649 -> 61968
strand -

CDS

ATGATCGATTATGAAATTCAAGGTAGTAAAGGTGGTTCGTCAAAACCACATACCCCTGTTGAAACACCTAACAACCTCCTGTCGGTTGCATATGCAAAAGTGTTGTTGGCTGTAGCTGAGGGTGAGCTTGCTGGTCAACCAACCGATAGAGATATTTACCTTGATGGTACACCACTTCAAAACGAAGATGGTAGTTATAACTTTGGTGGTGTTAAATGGGAATGGCGTTCTGGTTCTCAGGACCAAGAAGCAATTGAAGAGTTCCCTGAAGTATCTACAGAATATAGCGTTGGTATTGAACTGAAAGACAACGTTCAATGGACCCGTGCTGTAACTAAGTCTCAACTGACAGACCTTCGTGTGACGTTCCAATGGCCTGCTCTTATGGAACAAGCTAGCAACGGTGATACGAATGGTTATAAAATGCAATATGCCATTGATCTTTCTACAGACGGTGGTGCTTTCCAAGAGTATCAAGTTTACACAATTGATGGTAAGACGAACACTAGCTATGAACGAACTCACAAAGTAAAACTTCCTAAACAAGGTAGTAGCTGGACTATTCGTGCTCGTCGTGTAACACCTGAAAGTAGCTCCAGTACAATTCAGGACACAATCAACGTAAAGAGCTATGCTGAAGTAGTTGCTGTTAAACAACGTTACCCTAACACTGCTCTGTTGTATGTTGAATTTGATTCTCGTCTATTTGGTACTGGTAACATCCCTAAGATTTCGGTAAGGACCAAAGGTCGTGTAATTCAAGTACCAAGTAACTACAATCCAGAAACAAGGAACTATACCGGTATTTGGGATGGTAGTTTCAAGTGGGCTTGGACAAACAACCCTGCTTGGGTATTCTACGATCTGTTGACTCAAGATCGTTTTGGTCTTGGTCACAAAGTAACACCTGTAATGGTTGACAAGCTGGCACTGTATGAAATTGCTCAATACTGTGACGTAATGGTTGATGATGGTACTGGTTCTGGTACAATGGAACCACGACACACTTGTAACATCTTCATTCAGGATAAAGCAGGTGCTTGGAAGGTATTGCGTGATATCGCTGGTATCTTTAACGGTATGACATATTGGGATGGTAACAAGTTTGTTGCTGTTACTGACAAGTGGGAGCCAATCACTAACGCTCCAATGTTCTCTCGTTCGAACGTAGTTAATGGTAACTTTGATTATCAGGCGGCTGATGACAAGTCGATTTACACATCTGCTCTGGTATCGTATGATGATCCAGATAACCACTACAACACTGATGTTGAACCTACGTTTGAAACAAGTCAAATTGTTCGATGGGGTGGTGACCGTCAAGTAGAGATTACCGCTATTGGTTGTACGTCACGTGGTGAAGCACAGCGAAAAGGTAAGTATACACTTATCACCAACCTTTACAACAGAACAGTTAGCTTCCAGACAGGTTTACAAGGTCTATCTGCTGACGTTCTTCCGGGTAAGCTCATTCATGTACTTGACCCACTTCTTGGTGGTCGTCCATATACTGGTCGTATTAAGGCAAGTGCTGGTACTGTAATCACTCTTGATCGTGATGTAACGGCTGTCGCTGGTGATATTTTATACCTCACAATGGAAGATGGTTCGTCAGAAGGTCGTACCGTAGTAAGTGCAACAAACAACATTGTAACGGTATCTGTTAATTACAGCAAACCTATTCCTAGAAACTCGGTATGGTATCTGGAAGCATCTGACTTGAAGTCTCAGTTGTTCCGTGTAACGAAGGTAACCAACCCTTCCGCCAACGTGTACGAGATTGAAGGTGTAGAATACAACGAATCGAAGTATGATGCAATCGATAACGGTGCTCGTCTTGAACCTCGTCCAGTAAGTGTTGTTCCGCCGGGTCAGCAACAAGCTCCAACAAACTTGGTTGTTTCGTCATCTACATATATTGAACAAACAATGGCAGTTACGTCTTTGGTTGCTACATGGGATCAAATGCCTAATGCTGTACAGTATGAAGTGCAATGGCGGTACAATGATGGGGATTGGATTTCAGCTGGTATTACAGGTTCACCAACTATCACAATTAAGGGTATTTACACTGGTGACTACATCGTTCGTGTACGTGCGATCAATGCTATTGGTGTTAAATCTGTTTGGACAACTTCTGTATCTACACGTTTAGACGGTAAAACAGGTGGCGTGCCTGCTCTTGCTTATCTGACGACTACACCAATTGTATATGGTATCCGTTTGAATTGGGGATTCCCTGATGGTGCGGGTGACACTGCACGTACAGAGATTATGTACAGTACAAATCCGAACTTTGCTGATGCTATCAAACTAGGTGACTATTCGTATCCAACAGATATGCACGAAATGCACGGCTTGAAAGCTGGACAACAGTTCTGGTTTTGGGGTCGTCTGGTTGACCGTACCGGTAACATTGGTCCATGGAAACCTCTTGAATCCGAAAATGGTGTTCATGGTGTATCCTCTACCGACCAGAGTGAGTATGAAGAATATTTCAAGGAACAGATCACTGAAAGCTCTTTGTATAAAGAGTTGAATGACAGGATTGATTTGATCGATGGATTCGGACCGGGAAGTGTAAATGAGCGTGTAGAGACTGTTAATGATAGGGTAGATGAAGCCAATACTCGAATCGATCAGACCAATACTGATTTGGATAACGCTGTAGCTGATTTGGAAAGTCAGATTGCTAACATCACTGATGCAATGGTTTATGACCCGACAAAGACATATGTGACTGGAGATATCGTAAGGGTTGGTAATAAACTATTCCAAGCGATTCAAGATGTCCCAATCAACACTACACCACCAAACCTTACCTATTGGGAAGACGTTGGATCAATCCTTCAAGATGCGAATGCTGTAGTCACTCAAGTTGATATCAACACGCAGAAGATTGCTGAAGTCGATGGTAAGATCACTGCAACAGGTGAGCAAATCAACGGTTTGCAGGCGATGTGGCGTGACGATGATGGTGAAGGTGCTCTGAATGATGCAATTGATGGTTGGGGTTCAGCTGCAAAATATGCACAAGAGACAAAAGTTCGAGCATCTGAAGACGAAGCATTGTCTCAAAGAATCACATCTTTGAGTGCAACTGTTGATACAAACAAGGCTAGCATTACAACGATGGAAGTTGCTTTCGCAGATACGAAGAGTGCAAATGCTAGTAGAATGGATTCAATTCAGTCGCAGGTAAGTGGTAACTCAGCATCCATTTATGAACTATCCAAAACGGTTGCGAGCAACGATAAAGTTTCAACTGAAAAGATTAATACAATGCAGTCCAGCATTGATGGGAATACTTCCAAGATTACTTCCTTGGAAACAACAGTTACAACTCTTGAGACAACAACGGCTTCTTCGCTTGAGTTGGTTAACTCTAGAGTGGATGATACACAAGCATCTGTTGGTACTGAAGCAACAACACGTGCTAATGCTGACGCTGCTCTAAGTTTAAGGGTTGATACAACAGAATCGTCTATCGCAGACAACACAGCTAGCATTCAACAAGTTGAAGAGGCTCAAACTTCTTTGACAGAAAGTGTAACCAGACTTTCAACAAACGTTTCGTCTGGTTGGAGCGCTGTAAGGGATGACGATGATGATGGTTCCCTTCAAGAAGCTCTAGGTGGGGCTCAGGCCGCTGCAAACTATGGTCTTGAAGTAAGAACACGGACTGATGCTGACACAGCTATGACAACAAGGATTGAGACATTGACAGCTGCAATGGGTGTGAATACCGCAGCTATCTCAAACGAAGCAACAGTCCGAGCTAATGCTGACTCAGCGTTGTCAACCAGTATCTCAAATGTTCAAGCAGCAACAAACAGCAACACTGCTGCTATTCAGACAGTATCAAGTGCACAGACTACAACAGACGGTAAGTTAAATGCAATGTGGGCTGTTAAGGCTCAGGTTACATCACAAGGTCAATATGTAGCTGCTGGTTTTGGTCTTGGTATTGAGAACGGTCCTGCTGGTCTTCAATCTCAGTTCCTTGTTCAAGCTGACAAGTTTGCTGTGGTTAACGGGACCAATGCAACATTGACCGCTCCATTTGTTGTGACTGGTGGACAGGTGTTCATGAACGAAGCCTTGATTACTAAGGCTATGATTACGAACGCAATCATCGGTTCCACAATTACATCGTCTGTTCAAACAAACTGGGGTGGACCTATCATGACAATGGACTTCACAAACGGGTCAGTGACAACAAGACACCCTACAATGGCAAACACGTACACTCTCATGGATAGAGACGGCATCAAAGTGTACGTGAGTGGGGTACTTCGTGTAAGAATGGGTACTTGGTAA

Genome Context

Tertiary structure

PDB ID

cc23eb4b1c62d84edaec26f0f034de7c639a8c0a6b938c44ba08d86b40f3ff23

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6962

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence