Protein

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Genbank accession
UGL60892.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPPITWRNIGTTVSPGSARSLTAGTTGVQSALASLGDIIKQQQEMAVANAGVQREANTQNYLDQVASADLSQLQDPDFVAGLAGQRDAMGMRLDRAATRDAILNRRQALQKDTVSQQAFADQQAEVDQRGIVDELRTLAAQGRGRDVDAILAERQLINEGEIRKELAGVQDNLMQRQYRAAGEQRAQAAADRAAEAHQLSMTASRENLAYQRDLRQDAARERNDNKLADSAVMEISNQFRESRETANALLRDIGKEQGLPTDDTGLPDVSRMDPDQEASYREAVQSSGLSANLSATNEKQALVKTLRESGASPSAIQRATKQLDIMQGMDALAPEDAVKAENQVTAVNAELDRIQKQMTRNYETEVARNPFIEPSKTPLEDVTKTVEKLGKAGMPESERRLVADTLVEWSTNGMTTDGGQKIVVPSQLIAAAAASTDADSWIRNDAKSYLKNLQSLLGNKGMEQMAKDADSVRSDFLKEMTKLENDKLGNAYRVINSAKAKKGVSINPNDTVDRLLKRNF
Physico‐chemical
properties
protein length:520 AA
molecular weight: 56812,70110 Da
isoelectric point:5,18635
aromaticity:0,03077
hydropathy:-0,65058

Domains

Domains [InterPro]
DC_0193
STR
1–520
DC_0193
Coil
Unmapped
337–357
Coil
UGL60892.1
1 520
Architecture
STR
STR 1-520
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS_TUMS_P6
[NCBI] 		2900127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL60892.1 [NCBI]
Genbank nucleotide accession
OL519842 [NCBI]
CDS location
range 19945 -> 21507
strand +
CDS
ATGCCGCCTATCACTTGGCGTAACATTGGAACCACGGTAAGCCCCGGCAGTGCTCGTTCGCTGACTGCCGGGACTACTGGTGTCCAATCTGCATTGGCTTCGCTCGGCGATATCATCAAGCAACAGCAAGAGATGGCCGTGGCGAATGCTGGTGTACAGCGTGAAGCCAACACGCAAAACTACCTGGACCAGGTTGCTTCGGCTGACCTGAGCCAACTCCAAGATCCTGATTTCGTCGCTGGTTTGGCGGGGCAACGTGATGCCATGGGCATGCGTTTGGACCGTGCCGCAACCCGTGATGCGATCCTCAACCGCAGGCAAGCCCTGCAAAAGGACACTGTTTCTCAACAGGCATTCGCCGATCAGCAGGCTGAAGTAGATCAGCGGGGAATCGTAGATGAACTACGGACCCTGGCTGCTCAAGGCCGTGGCCGTGATGTAGATGCCATCCTGGCTGAACGTCAGTTGATCAACGAGGGCGAGATCCGTAAGGAACTGGCGGGTGTCCAAGACAACCTGATGCAACGTCAGTACCGGGCAGCCGGTGAACAACGTGCTCAGGCTGCTGCGGACCGTGCTGCTGAAGCTCACCAGTTGTCCATGACTGCTAGTCGGGAGAACTTGGCGTACCAGCGTGATCTGCGTCAGGACGCAGCACGCGAACGGAATGACAACAAGCTGGCCGACAGTGCAGTAATGGAGATCTCCAACCAGTTCCGGGAAAGCCGGGAAACGGCCAATGCTCTGTTGCGGGATATCGGCAAAGAGCAGGGTCTTCCTACTGACGACACTGGTTTGCCGGATGTATCCCGTATGGATCCGGACCAAGAAGCCAGCTACCGAGAGGCAGTTCAGTCCTCTGGTTTGTCGGCCAACTTGTCGGCGACGAACGAGAAGCAAGCCTTGGTCAAGACCCTACGTGAGTCTGGTGCTTCGCCGTCTGCTATTCAGCGAGCCACGAAGCAACTGGACATCATGCAAGGCATGGATGCACTGGCACCTGAAGATGCTGTAAAGGCGGAGAACCAGGTGACTGCGGTCAATGCTGAGTTGGATCGAATCCAGAAGCAGATGACCCGCAACTACGAGACCGAGGTTGCTCGTAACCCGTTCATCGAACCGAGCAAGACTCCGCTGGAAGACGTTACGAAGACGGTGGAGAAACTGGGCAAAGCTGGTATGCCTGAATCGGAACGGCGTCTGGTTGCGGATACTCTGGTCGAATGGTCCACCAACGGTATGACTACCGATGGCGGTCAAAAGATCGTAGTTCCTTCCCAGTTGATCGCCGCTGCTGCTGCATCTACCGATGCCGATTCCTGGATCCGGAACGATGCGAAGAGTTACCTCAAGAACCTACAAAGTCTCTTGGGTAACAAGGGTATGGAGCAAATGGCCAAGGATGCAGATTCCGTGCGGTCGGACTTCCTCAAGGAGATGACCAAACTGGAAAATGACAAACTGGGTAATGCCTATAGAGTAATCAACTCGGCAAAGGCCAAAAAGGGTGTTAGTATCAACCCCAATGACACCGTTGATCGATTGCTCAAAAGGAATTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e6f2b3ce7b2182d7f833a4451cfccbb16e2e8f0e071785bcaa60b1906de3edfc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7014
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome analysis of Pseudomonas phage vB_PaeS_TUMS_P6 Kamyab,H., Torkashvand,N., Shahverdi,A.R., Khoshayand,M.R., Sharifzadeh,M. and Sepehrizadeh,Z. 2023-04-25 — GenBank