Protein

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Genbank accession
ALT58349.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MTIAIKRDNGDLIWFDAVTEFGRQYRGSVSSSPIETGGKITDHVTTENPVFTLTAIVSDADFNLNRPVINDNEAQTYKINNKEFVNTQPVSVPAVITTSRFDPSRIFPEVITQFIPPEIPSATVLPQKGDKVAYDIERQLIDMQRNAEVFSLLDFRDGIIWDQIERCIFTDLSFSENAETGQSIQPRMTIEAVTFTDTRYIEVRVNKGRKTAKKEKRDTKDGDTGASNATGQDSPTFKRSQMKEAQIRTQVAR
Physico‐chemical
properties
protein length:253 AA
molecular weight: 28517,63810 Da
isoelectric point:5,28093
aromaticity:0,07905
hydropathy:-0,53478

Domains

Domains [InterPro]
IPR048494
ATT
15–203
IPR048494
DC_1100
STR
26–253
DC_1100
ALT58349.1
1 253
Architecture
ATT
STR
ATT 15-203 | STR 204-253
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaoP5
[NCBI] 		1716042 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALT58349.1 [NCBI]
Genbank nucleotide accession
KU297675.1 [NCBI]
CDS location
range 38073 -> 38834
strand +
CDS
ATGACAATTGCTATCAAGAGAGATAACGGAGACCTGATTTGGTTTGATGCTGTCACTGAGTTCGGAAGACAATATCGTGGTTCTGTTAGTTCCAGCCCTATTGAAACGGGAGGGAAGATCACAGACCACGTTACAACTGAAAACCCGGTGTTCACGCTCACTGCTATCGTATCCGATGCAGACTTCAACCTGAACAGGCCTGTTATCAACGACAACGAGGCTCAAACTTACAAGATCAACAATAAAGAGTTCGTGAATACTCAGCCGGTCAGTGTGCCGGCTGTTATCACAACGTCTAGATTTGATCCGAGCCGAATTTTCCCGGAAGTTATTACTCAGTTTATTCCTCCTGAGATTCCGTCTGCTACTGTCCTCCCTCAAAAGGGTGATAAAGTCGCTTATGATATTGAGCGCCAACTGATCGACATGCAGCGTAACGCTGAGGTCTTCAGCTTGCTGGATTTCAGAGACGGTATTATCTGGGATCAAATTGAGCGGTGCATCTTTACCGACTTGTCCTTCAGCGAGAATGCTGAAACTGGACAGAGTATTCAACCTAGAATGACTATCGAGGCCGTGACATTCACAGACACTCGCTACATTGAAGTTAGGGTGAACAAGGGAAGAAAGACAGCCAAGAAGGAAAAGAGAGACACCAAAGACGGTGATACAGGGGCTAGTAACGCCACTGGACAAGACTCTCCTACATTCAAGCGTAGCCAGATGAAAGAGGCTCAAATTAGAACTCAAGTTGCGAGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fb5d4a7e63958d1c8516680ddb23ca17a79a60226bebb310eb7976193f44f8cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7307
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic identification of Pseudomonas aeruginosa phage PaoP5 Lu,S., Shen,M., Le,S., Li,G., Tan,Y., Zhao,X., Wang,J., Shen,W., Guo,K., Yang,Y., Zhu,H., Li,S., Li,M., Zhu,J., Rao,X. and Hu,F. 2016-09-23 — GenBank