Protein

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Genbank accession
ATN93312.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,70
Protein sequence
MGSGKGGSVTVGYHYYMNVHFSLAHGGVDELLEIRVGDRTAWRGNITGAGSAMVNQPNLFGGEKREGGVLGVVDFMPGDASQPLNPSLQRAVIRATGATAVPAYRGLSTVFFKGLDGVDLTGTPWIEANKGTVDPSSELPPTTGFKDLLQYASSILSWKSLVRGSFLWSAMNPYFKTPAFLVRRVWKGWYPEKAKIGADVNPVHIIYESLINKTWGLGYPTIDIDDANFRAAADVLYNEGFGLSLKWTKQVRISEFIDLVKEHINANVVEDRETGKFRIILVRDNYDPQNLFELNESNCTLEDFQRKTFGETVNEVTVAYTRPEDGETDTVTVQDLANFSNTGQISSQKKEYPGIRDANLAFKVALRDLNTLSKPVAKCTITCNRSILGHYPGDVVKINWPRLGLNGVVLRIGKMNLGNAQSGQIQIEAVEDMFGLPQSAYMDRQPIGWVDPSQDTEPVNNQKLYELSYYELYTGTDSSDRLDWPSDVGFVAVSGQAPNSDADSMSLLDTTTEQVVAGGELTPVITLTTDCTHMQSTLQVDTSSIDPLELLDGGLAWLGNELIEITGFDTANDTIAVNRGMIDTVPDEHAPGDRIWVYGQNTYVLDPTVRVEGEVVDYKLLTETSKGQLDENQAPVVSYTLVNRVQRPYPAGNLKILDDYFPQAVNGEDGVLNLTWAHRDRTQQLAPSPVLFTDGDVGDGTGRAYEVEVQNEDGDTVINSSLGTVTSFDYASEAADLNKPVNPAGALYRRTTVLSDQGKPLFIGGELQGIPYVYRPIQFDSVTGYIEAVREYTTTTGQVLRASGGWVADRHPFNISARAFNLGQDFYSNNFRLGETSGTNDYWTVYAGQPGVFLKLEPDGGKSEVTLPWKDTEEVKGTFTVNNQVVSFSQTSSTVARSTLPPFAPGTVISPLGDSTGDDIFDVTITDTHVVATTWGRIISTPIGSEGVTWSVLHSGVSGEALKTLDHGPGGIVSAGVDNGTGKVWLSTDGGSNWTEIASGKGFNNAFWFGTRLFAIGESFIDYSDDDGSTWSSATINGTETPAFHSPMKNMTSLAILGGKGDDPNDQYGGTVYTSSDNGLTWDRSLGTPAGSALFTGAQSGSDWIVFGRKDVGQDAHVWIIVSTDGGVTWTELTDLYDGFLGAVSDCCVVNGHWFGVFTNAFSQSKFLTAPVGSTDKFDFDEAGSNLNYLATLLESYNDSILALGTVDDSGYQDLTSNTTSYQDWFRTSSDMSTWSSATTTPVSPRDTFATYQLRNGFDLGNPTGHLAFANGYYYTGHKGARIYRSPDLVNWEICDTPIMRLSRFTFEHVRVILSDGQNVVALVFTDVQGGDGYETYDQVEIWSSTDGFTFTKTYGHDWDVNGDRTHDQGIVTDTGFVFYGPRGLLVSEDDGQTWNHRVTQNVPFALFTNATLIWMQGDYDLSGVLKASSDYAVTQSDAKPDDLVSSEVVTPPTTYRLNDQLRVKLDVVENGMSGYQAHDHEFKRVGYGYRYGEYYGGTL
Physico‐chemical
properties
protein length:1500 AA
molecular weight: 163926,35800 Da
isoelectric point:4,54993
aromaticity:0,10667
hydropathy:-0,31013

Domains

Domains [InterPro]
DC_1879
ATT
2–267
DC_1879 DC_1311 cd15482
DC_1657
STR
229–442
DC_1657 IPR036278
IPR032876
ATT
251–413
IPR032876 G3DSA:2.120.10.10
IPR036278
STR
1063–1401
IPR036278
ATN93312.1
1 1500
Architecture
ATT
STR
RBD
ENZ
STR
ATT 2-413 | STR 414-442 | RBD 443-760 | ENZ 934-945 | STR 946-1401 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATN93312.1
1 1500
Domain Start End Length (AA) Confidence
N-terminal 1 956 956 0,8844
Central domain 957 1222 267 0,6396
C-terminal 1223 1500 277 0,1938
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-956
Central
957-1222
C-terminal
1223-1500

Taxonomy

  Name Taxonomy ID Lineage
Phage Marinobacter phage PS6
[NCBI] 		2041342 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Marinobacter
[NCBI] 		2742 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN93312.1 [NCBI]
Genbank nucleotide accession
MF959998 [NCBI]
CDS location
range 48937 -> 53439
strand -
CDS
ATGGGTAGTGGAAAAGGTGGTTCGGTAACGGTCGGTTACCACTACTACATGAATGTTCATTTCTCCCTGGCACACGGTGGTGTTGATGAACTCCTTGAGATCCGAGTGGGGGACCGCACGGCATGGAGAGGTAACATTACTGGTGCCGGGTCTGCCATGGTCAACCAACCCAATCTGTTCGGCGGGGAGAAGCGCGAAGGTGGTGTACTGGGTGTTGTTGACTTCATGCCCGGTGACGCATCACAGCCGCTGAATCCATCACTCCAAAGGGCTGTCATTAGGGCGACAGGGGCGACGGCGGTACCGGCCTACCGAGGGTTGAGCACTGTATTCTTCAAGGGACTTGATGGCGTTGATCTCACCGGAACGCCGTGGATTGAAGCCAACAAGGGTACTGTAGACCCGAGCAGTGAATTACCCCCAACCACCGGCTTCAAAGACCTTCTTCAGTACGCATCCAGTATCCTGAGTTGGAAATCGCTGGTCAGAGGGTCATTCCTTTGGTCTGCAATGAACCCGTACTTCAAGACACCTGCTTTTCTGGTCCGGCGTGTATGGAAGGGTTGGTACCCTGAAAAAGCTAAGATTGGTGCTGATGTGAACCCTGTTCATATCATCTATGAGTCACTGATCAACAAAACCTGGGGTCTCGGGTATCCTACTATCGACATTGACGACGCCAATTTCAGAGCCGCCGCGGATGTTCTTTACAACGAGGGATTCGGGTTATCGTTGAAGTGGACGAAGCAGGTACGCATCAGCGAGTTCATCGATCTGGTCAAGGAACACATCAACGCGAACGTGGTTGAAGACCGGGAAACAGGTAAGTTCCGTATCATCCTGGTGCGGGATAATTACGACCCACAGAACCTGTTCGAACTGAATGAGTCGAACTGCACACTTGAGGATTTCCAACGAAAGACATTCGGTGAGACGGTCAATGAGGTGACGGTTGCCTACACCCGTCCGGAAGACGGAGAGACCGACACTGTGACAGTCCAGGACCTGGCGAACTTCTCGAACACTGGGCAGATCAGTTCCCAGAAGAAGGAATACCCTGGTATTCGGGATGCAAACCTGGCATTTAAAGTTGCGCTCAGGGACCTGAATACACTGTCGAAACCGGTTGCCAAGTGTACCATTACCTGCAATCGATCGATCCTCGGTCACTACCCCGGTGACGTGGTGAAAATCAACTGGCCCAGACTCGGGTTGAACGGTGTTGTACTGAGGATCGGCAAGATGAACCTCGGTAATGCCCAGAGTGGACAGATTCAGATTGAGGCAGTGGAGGACATGTTTGGGCTCCCGCAGTCTGCCTACATGGACCGTCAGCCGATTGGGTGGGTAGACCCGAGTCAGGATACTGAACCTGTAAATAATCAAAAGCTCTACGAGTTGAGCTATTACGAGCTCTATACCGGTACCGACTCGTCAGATCGTTTGGATTGGCCTTCAGATGTTGGTTTCGTGGCTGTATCAGGGCAGGCCCCGAATTCAGATGCCGACTCAATGAGCCTGTTGGACACAACAACGGAACAGGTTGTAGCTGGTGGTGAACTCACCCCGGTCATTACGCTGACAACAGATTGTACCCACATGCAATCCACCCTGCAGGTGGACACGTCGAGCATTGATCCCCTTGAGCTCCTTGATGGTGGACTGGCCTGGTTGGGTAATGAGCTCATTGAAATTACAGGGTTCGACACAGCCAATGACACCATCGCGGTTAATCGCGGCATGATTGACACCGTGCCGGACGAACACGCTCCCGGTGATCGCATCTGGGTTTACGGACAGAACACCTATGTGCTAGACCCAACGGTGAGAGTCGAGGGTGAGGTTGTCGATTACAAGTTACTGACGGAAACCTCGAAAGGACAGTTGGATGAAAACCAGGCTCCGGTTGTCAGTTATACCTTGGTCAACAGGGTCCAACGACCGTACCCGGCCGGCAATCTGAAAATACTGGATGACTACTTCCCACAAGCCGTCAACGGTGAAGACGGTGTTCTCAATCTCACATGGGCTCACCGTGACAGGACCCAACAACTCGCTCCTTCCCCCGTGCTGTTCACAGATGGTGATGTGGGCGACGGTACCGGTCGGGCTTACGAGGTTGAGGTGCAGAATGAGGATGGTGATACTGTCATTAATTCATCCCTCGGTACCGTCACATCGTTTGATTATGCTTCGGAGGCGGCGGATTTAAACAAACCGGTTAACCCCGCAGGTGCCTTGTACAGACGAACAACCGTTCTCTCCGATCAGGGTAAACCCTTGTTTATTGGAGGCGAACTGCAGGGTATTCCCTATGTCTACCGACCGATCCAGTTTGACTCGGTAACGGGTTATATTGAAGCGGTGAGAGAGTATACAACTACCACGGGACAGGTTCTCCGGGCATCCGGTGGTTGGGTTGCGGATCGACACCCATTCAATATTTCCGCCAGGGCTTTCAATCTGGGACAGGACTTCTATTCCAACAATTTCCGCCTGGGTGAGACTTCCGGAACCAATGATTACTGGACGGTGTATGCCGGTCAACCAGGTGTGTTCCTGAAACTCGAACCCGACGGTGGGAAAAGTGAAGTAACTCTACCGTGGAAGGACACCGAGGAAGTTAAAGGAACATTCACCGTGAACAACCAGGTGGTCAGTTTCTCCCAGACTTCTTCCACTGTCGCAAGGTCAACCCTTCCACCTTTCGCCCCGGGAACAGTGATTTCCCCATTGGGAGACTCGACAGGGGATGACATTTTCGATGTCACGATTACCGACACCCATGTGGTAGCAACAACCTGGGGTAGGATTATTTCAACGCCGATTGGATCAGAGGGTGTTACATGGTCGGTGCTTCACAGCGGTGTCTCAGGGGAAGCCCTCAAGACTCTGGACCACGGACCAGGGGGAATCGTATCAGCCGGCGTTGATAATGGTACCGGTAAGGTCTGGTTGAGCACAGATGGTGGTAGCAACTGGACTGAGATCGCATCCGGTAAAGGATTCAATAACGCCTTCTGGTTCGGTACCCGGTTGTTTGCCATTGGGGAATCGTTCATTGATTACAGTGACGATGACGGATCAACGTGGAGCTCTGCCACGATCAACGGAACCGAGACCCCGGCATTCCATTCACCCATGAAAAACATGACCTCCCTGGCCATCCTCGGCGGCAAAGGTGACGACCCCAATGATCAATACGGAGGCACGGTCTACACGTCTTCAGACAATGGTTTGACTTGGGACCGTTCACTGGGGACGCCAGCAGGTTCAGCCCTGTTCACAGGTGCTCAGAGTGGCAGTGACTGGATTGTATTCGGTCGCAAGGATGTGGGGCAGGACGCTCACGTTTGGATTATTGTCAGCACGGATGGGGGAGTAACGTGGACCGAACTGACAGACCTGTACGATGGCTTCCTTGGTGCGGTCAGTGATTGTTGCGTGGTGAATGGTCACTGGTTTGGTGTTTTCACCAACGCTTTCAGTCAGAGTAAATTCCTGACCGCCCCCGTCGGTTCCACTGATAAGTTCGATTTCGACGAAGCAGGTAGTAACCTGAACTATCTGGCAACGCTGTTGGAGTCTTACAACGATTCCATTTTGGCGTTGGGGACTGTGGATGACAGTGGCTACCAGGACCTGACCAGCAATACAACGTCTTACCAGGACTGGTTCCGGACATCTTCCGACATGTCAACCTGGTCGTCGGCAACGACAACCCCGGTGTCACCCCGAGATACGTTTGCAACCTATCAGTTGAGAAATGGGTTTGATCTCGGGAACCCAACGGGACACCTCGCATTTGCCAACGGGTACTACTACACAGGACACAAAGGAGCCCGAATTTACCGGTCGCCCGATCTAGTGAACTGGGAAATCTGTGATACACCCATAATGCGACTCAGCCGTTTTACCTTCGAACATGTCAGGGTAATCCTGTCGGATGGTCAGAACGTTGTCGCACTGGTGTTCACGGACGTGCAGGGTGGAGACGGTTACGAAACTTACGATCAGGTAGAAATCTGGTCATCTACTGACGGGTTCACGTTCACGAAGACCTACGGTCATGACTGGGATGTGAATGGTGACCGTACTCATGACCAGGGAATTGTGACCGACACTGGATTCGTGTTCTACGGTCCCCGGGGACTACTGGTGAGTGAGGACGATGGGCAGACCTGGAACCATAGGGTTACACAGAACGTCCCGTTTGCCCTGTTCACCAACGCAACCCTGATATGGATGCAAGGGGACTACGATCTCAGTGGTGTACTCAAGGCCAGTTCTGATTATGCCGTCACTCAAAGTGACGCGAAGCCGGACGATCTGGTGAGCTCTGAGGTAGTGACGCCTCCGACTACTTATAGACTCAACGACCAGTTGAGGGTTAAATTGGACGTTGTTGAAAACGGAATGAGTGGTTACCAGGCACACGACCATGAATTCAAACGGGTCGGTTACGGCTATCGATACGGTGAATATTACGGGGGAACTCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
28fd2c2203468a8f34d11e9d2bb3aeb3b485d11cb9d7f2a4483d9061956bcde8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6278
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Marinobacter Phage PS6 Zhu,M. 2018-09-14 — GenBank