Protein

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Genbank accession
YP_009821377.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQEIKTVIQYPTGSTEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVATTGFDRVEIRRFTSASERVVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPEDDAGNLDARNRKTVRLAPGETGTDAVNKNQLDETLGEAGGILSSIKDTQKEVVDFIEEFANDTGVVRGVRVVYNNGSANGGETSFVINKEGPVLAVPLLEINGSTQTEGWHYDYTPSTKTVRLVKPLEAGDFVVAQVASSVTDVETALRGPNGASMIGMPQGGSLKQAVTWRSILSFGAVGDGSTDDTAAFQAAWEAPDVYIMIPTGYRFVVTAPVGSLTVGKAKRWCGERGSVIITKGLGGFHQTGLGWSFEGIRFVPLAVAPMATVPFAIKSGTVDNNRYSSIVSCEFRGYTSGQRYDVAVDLYNVWYSKIENLYINQSGEGDFSKQSFGGIGLRMSYCVNNNITNCQIGSCTTGMLVTANTRPVPAGGTTHCCEGLIIHANTMIANKCNLDVREGYFIKVTNNVIDIPLSSTVNPVYFAAMSSQLTDNWISTATGTIYIGRGESGLQAYDGSTNVISRNTIRSSSSATHDNIRVGAGVGLLNIIGNTITFGGTGISADGRSSGWYMSDNIFAAQSIQAYDVHLVTNMRVGTNKVYSAGKPTKSVHSSTVLTPTTFSAFATADLVDGAIGENKITGPQQFNIAVPEGYFVGAPEFAIANLASGRILGVARYLRSESSATSLRFSFVSIGGPIVAGNYAFSVMASDRASSF
Physico‐chemical
properties
protein length:771 AA
molecular weight: 82567,73100 Da
isoelectric point:5,68352
aromaticity:0,08690
hydropathy:-0,06667

Domains

Domains [InterPro]
IPR005604
ATT
1–127
IPR005604 IPR011050 DC_1029
DC_0778
STR
1–492
DC_0778
IPR012334
STR
292–679
IPR012334
YP_009821377.1
1 771
Architecture
ATT
STR
RBD
ATT 1-127 | STR 128-679 | RBD 680-770 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009821377.1
1 771
Domain Start End Length (AA) Confidence
N-terminal 1 306 306 0,9940
Central domain 307 662 357 0,9929
C-terminal 663 771 108 0,9747
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-306
Central
307-662
C-terminal
663-771

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Pharr
[NCBI] 		2562178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009821377.1 [NCBI]
Genbank nucleotide accession
NC_048175.1 [NCBI]
CDS location
range 33012 -> 35327
strand +
CDS
ATGGACCAAGAAATTAAAACAGTCATCCAGTACCCCACAGGGTCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTGTCGGACGACAACCGCAGACTGTTAAGCAACATCACTGAGTACCGCTACGTGTCCAAGACCAGAGTCAAACTGCTGGTGGCGACAACAGGTTTTGACCGTGTAGAGATTCGACGGTTCACATCGGCGTCAGAGCGCGTGGTTGACTTTAGCGACGGTTCTGTGTTACGCGCCAACGACCTCAATGTCTCGCAGCTACAGTCTGCGCACATCGCTGAAGAAGCACGTGATGCTGCACTTCTGGCAATGCCTGAGGATGATGCTGGTAACCTCGACGCCCGTAACCGTAAGACTGTGCGACTGGCTCCCGGAGAGACGGGTACCGACGCGGTCAACAAGAACCAGCTGGATGAAACTCTAGGGGAGGCTGGCGGTATCCTCAGCTCTATCAAAGATACCCAGAAGGAAGTTGTGGACTTCATTGAGGAGTTCGCAAACGACACTGGTGTGGTGCGGGGTGTTCGCGTTGTGTACAACAACGGTTCAGCCAACGGTGGTGAGACATCCTTCGTCATCAATAAGGAGGGACCTGTACTGGCAGTGCCGCTGCTGGAAATCAACGGGTCGACTCAGACAGAGGGTTGGCATTACGACTATACCCCAAGCACTAAAACTGTGCGGTTGGTAAAGCCGCTAGAGGCCGGTGATTTCGTGGTTGCCCAAGTTGCTTCCAGCGTAACAGACGTTGAGACTGCCCTGCGCGGACCTAACGGTGCATCCATGATTGGCATGCCCCAAGGCGGCTCATTGAAACAGGCAGTGACTTGGCGAAGCATCTTGTCGTTTGGCGCTGTTGGTGATGGCTCAACTGATGATACGGCTGCCTTCCAAGCGGCGTGGGAAGCTCCAGATGTGTACATCATGATTCCTACTGGCTACCGCTTCGTGGTTACCGCCCCAGTCGGCTCATTGACTGTAGGCAAAGCCAAGCGGTGGTGCGGTGAGCGCGGCTCAGTCATCATTACAAAGGGCTTAGGTGGTTTCCACCAGACTGGCCTTGGGTGGAGCTTCGAGGGAATCCGCTTTGTCCCGCTGGCAGTGGCCCCCATGGCCACAGTGCCGTTTGCCATTAAGTCAGGAACCGTGGACAACAATAGATACTCATCAATCGTAAGCTGTGAGTTCCGTGGGTATACCTCGGGGCAGCGTTACGATGTGGCGGTTGACCTGTATAACGTGTGGTACTCCAAAATCGAGAACCTGTACATCAACCAGTCTGGTGAGGGCGACTTCTCTAAGCAATCCTTTGGTGGCATAGGCCTCCGTATGAGTTACTGTGTCAACAATAATATCACAAACTGTCAAATCGGTAGCTGCACAACGGGTATGCTCGTCACGGCTAACACTCGACCAGTTCCTGCCGGTGGGACAACGCACTGTTGCGAGGGGCTGATTATCCATGCCAACACCATGATTGCCAATAAGTGCAACTTGGACGTTCGTGAGGGTTACTTCATCAAGGTGACCAACAACGTGATTGACATCCCGCTCTCATCAACGGTCAACCCGGTGTACTTCGCGGCCATGTCCTCACAGCTCACCGATAACTGGATATCTACCGCCACAGGCACAATCTACATCGGTCGAGGCGAGAGTGGCTTGCAGGCTTATGACGGCAGTACGAACGTAATCTCTCGTAACACCATCCGTAGCTCAAGCTCAGCGACTCACGACAATATCCGTGTGGGGGCTGGTGTGGGCCTGCTGAATATTATCGGTAACACTATCACATTCGGTGGCACCGGAATCTCAGCTGACGGCAGGTCGTCTGGTTGGTACATGTCCGATAACATCTTTGCGGCGCAGAGCATTCAGGCCTATGATGTACATTTGGTCACAAACATGCGTGTTGGCACCAACAAGGTGTATTCGGCGGGCAAACCAACCAAGTCCGTTCACTCCAGCACCGTGCTGACCCCCACCACCTTCAGTGCGTTTGCTACGGCTGACCTCGTGGATGGCGCAATAGGCGAGAACAAGATTACAGGACCGCAACAGTTCAACATCGCCGTTCCTGAGGGTTACTTTGTGGGGGCACCTGAGTTCGCCATCGCTAATCTGGCCAGCGGAAGAATCTTAGGCGTTGCCCGGTACCTACGAAGCGAGTCTAGCGCTACATCCCTGCGATTCTCTTTCGTGAGCATCGGCGGTCCGATTGTCGCTGGTAACTATGCGTTCAGTGTAATGGCCTCAGACCGCGCCTCATCTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
52c09512e34b94cd5ddbce8de2cc8a65565d032997532fb43435db6bfdcaaf5c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7842
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumoniae podophage Pharr Michalik,J., Lessor,L., Gill,J. and Liu,M. 2019-09-26 — GenBank