Protein

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Genbank accession
YAF82870.1 [GenBank]
Protein name
long tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MAGMLINITDAGRAALVAGGNTGTAARRVVEIGLGAAPFAFDRGMQAMPNERKRVTTFGGENVAPDTVHVVIQDDTSDQYSLYAFGLYLDNGVLFAVYVQDTPILEKSPAAMMLLAGDVVFATIDAAKLEFGPATFLNPPATTERKGVIELATQAEVDAGEDDTRALTPKTAKRRYAALSGATFDGRVRVVADADERAAQLDVSPKTPGVGKTGKARLFGTFGDATLPDLSPRLVATLRAGFDAGAWGREYVDVCLNDGTNNDAASDAKQKRVARFTSGGRVLIGERVDDGKTALQVRGGVDASEGFTARAIDAGGAGGQFRAVCNGYGALIRNDGGCVYLLSTAKGAPDGTCNDYRPFSWSLTTGLVSVDGSGSGAVFGGAVNIARDLDVGRKANEAHIRLGPVDGYLYANPVSTGWWSPTGSSYQYIFADHTFRIDGRIVWHEGNLDPLDKGKGGTLAGDVSFAPGKRLVLAEGSPSAPSLAFANDGEPATGLYHAADGAFGVTCNGRAVARFSPLLAAFEQPRRSARLSSSRERPCGPAS
Physico‐chemical
properties
protein length:543 AA
molecular weight: 56687,78260 Da
isoelectric point:5,72382
aromaticity:0,07919
hydropathy:-0,14549

Domains

Domains [InterPro]
DC_1549
ATT
1–292
DC_1549 IPR048390
YAF82870.1
1 543
Architecture
ATT
ATT
ATT 1-292 | ATT 296-359 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAF82870.1
1 543
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9665
Central domain 177 375 200 0,1956
C-terminal 376 543 167 0,7863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-375
C-terminal
376-543

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_HM913
[NCBI] 		3461040 Viruses >
Host Burkholderia pseudomallei
[NCBI] 		28450 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF82870.1 [NCBI]
Genbank nucleotide accession
PX105071.1 [NCBI]
CDS location
range 28785 -> 30416
strand -
CDS
ATGGCAGGAATGCTCATCAACATCACGGACGCCGGCCGCGCGGCACTCGTCGCCGGCGGCAACACAGGCACGGCCGCGCGCCGCGTCGTCGAAATCGGGCTCGGCGCCGCGCCGTTCGCGTTCGATCGCGGCATGCAGGCGATGCCGAACGAGCGCAAGCGCGTGACGACGTTCGGCGGCGAAAACGTCGCGCCGGATACGGTGCATGTCGTGATTCAGGACGACACGAGCGACCAGTATTCGCTGTACGCGTTCGGCCTGTACCTCGACAACGGCGTGCTGTTCGCCGTGTACGTGCAGGACACGCCGATTCTCGAAAAATCGCCTGCGGCGATGATGCTGCTCGCGGGCGACGTCGTGTTCGCGACGATCGACGCGGCGAAGCTCGAGTTCGGGCCGGCGACGTTCCTGAATCCGCCGGCGACGACCGAGCGCAAGGGCGTTATCGAGCTCGCCACGCAGGCCGAAGTCGATGCAGGCGAAGACGACACGCGCGCACTCACGCCGAAGACGGCGAAGCGGCGCTATGCGGCGCTGTCGGGCGCGACGTTCGACGGGCGCGTGCGTGTTGTCGCCGACGCTGACGAGCGCGCCGCGCAGCTCGACGTGTCGCCGAAGACGCCCGGCGTCGGCAAGACCGGCAAGGCGCGTCTGTTCGGCACGTTCGGCGACGCGACGCTGCCCGATCTGAGCCCGCGCCTGGTCGCGACGCTTCGCGCCGGATTCGATGCCGGCGCATGGGGCCGCGAGTACGTCGATGTCTGCCTGAACGACGGCACGAACAACGATGCGGCGAGCGATGCGAAGCAGAAGCGCGTCGCGCGCTTCACGTCGGGCGGCCGCGTGCTGATCGGCGAACGCGTGGACGATGGCAAGACCGCGCTGCAGGTGCGCGGCGGCGTCGACGCGTCGGAAGGCTTCACGGCGCGCGCGATCGACGCGGGCGGCGCCGGCGGCCAGTTCCGCGCGGTCTGCAACGGCTACGGCGCGCTCATCCGCAACGACGGCGGGTGCGTGTATCTGCTGTCGACGGCGAAGGGCGCACCGGACGGCACGTGCAACGACTATCGGCCGTTCTCGTGGTCGCTGACGACGGGGCTGGTGAGCGTCGACGGCAGCGGATCGGGCGCGGTCTTCGGCGGCGCCGTGAACATCGCCCGCGATCTCGACGTCGGCCGGAAGGCAAACGAAGCGCATATCAGGCTCGGTCCGGTCGACGGCTACCTCTACGCGAACCCGGTCAGCACCGGCTGGTGGTCGCCGACTGGTTCGTCCTATCAGTACATCTTCGCCGATCACACGTTCCGCATCGACGGGCGGATCGTATGGCACGAAGGCAACCTCGACCCGCTCGACAAGGGCAAGGGCGGCACGCTGGCCGGCGATGTGTCGTTCGCGCCAGGCAAGCGGCTCGTGCTCGCCGAAGGCAGTCCGTCCGCGCCGTCGCTCGCGTTCGCCAACGATGGCGAACCGGCTACCGGCCTCTATCACGCGGCGGACGGCGCGTTCGGTGTGACGTGCAACGGGCGCGCCGTCGCGCGCTTCTCGCCATTGCTCGCGGCCTTCGAGCAGCCCCGACGATCGGCCAGATTGTCTTCGAGCCGAGAACGACCGTGCGGCCCGGCTTCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
784e90d6089181f14a3f626f06c0e9cc8abdf1e0a071d9038b29e12b704301e4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8441
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50