Protein

View in Explore
Genbank accession
XWX36095.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MYKQIFNKTNGKPELIKSIKNKETGEEYFDYNESEYTAEIPSSNLYEPIHFENGEWKGVTREEYLKRQPKVEIEEAPDDKDVLIADLTLQLMQTQNTVVNLQNDMANLTLQVLESDSNA
Physico‐chemical
properties
protein length:119 AA
molecular weight: 13805,16480 Da
isoelectric point:4,45575
aromaticity:0,08403
hydropathy:-0,85546

Domains

Domains [InterPro]
DC_0222
STR
1–119
DC_0222
Coil
Unmapped
84–111
Coil
XWX36095.1
1 119
Architecture
STR
STR 1-119
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_89
[NCBI] 		2815641 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX36095.1 [NCBI]
Genbank nucleotide accession
MZ417349.1 [NCBI]
CDS location
range 39460 -> 39819
strand +
CDS
ATGTATAAACAAATTTTTAACAAGACCAATGGTAAACCTGAATTAATTAAATCAATAAAAAACAAAGAAACTGGAGAAGAATATTTTGATTACAATGAATCAGAATATACAGCAGAAATACCTTCTTCAAATTTATACGAACCAATTCATTTTGAAAATGGTGAATGGAAAGGTGTTACTAGAGAAGAATATTTAAAACGACAACCTAAAGTGGAAATTGAAGAAGCACCCGATGACAAAGATGTTTTAATAGCAGACCTAACATTACAACTAATGCAAACACAAAATACAGTAGTAAATTTACAGAATGATATGGCGAATTTAACATTACAAGTTTTGGAGAGTGATAGCAATGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a71814c11cd35fc0f04942ac26cd86a43ddbf6516d8df666386f9e852d3eb947
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9290
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank