Protein

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Genbank accession
CAG27194.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,94
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MKHKETPFQRASSGHVLQVGDNGSCHVGDHGTAIAGKNSVATAANNGHAVSGDYGTAIVERFGIASAGNKGMAIAGDCGSATAGDHGIATAGNYSTATVGYLGTATAGKKGKATAGDWGTAIVGLDGVASAGKNGKIHIQYFDSEANRYRTAVGYIGEDGLEPGVPYQLDENHEFVKGDIAMTKFSTEGHVTILFRGLGVGLINVQVVRVTKGIGHPKPFFHIEGSEDKGYRLLHNGSEWIDQVFEAKKAVLFIESLYPPVTPDKETVKLTVPEDQQILVKVRRVNKLALDAVVFHIDTLGGAYQVSYTEQLTPDLNQLTHVELVVI
Physico‐chemical
properties
protein length:327 AA
molecular weight: 34582,45940 Da
isoelectric point:6,14926
aromaticity:0,07339
hydropathy:-0,15015

Domains

Domains [InterPro]
SSF69349
STR
3–134
SSF69349
CAG27194.1
1 327
Architecture
STR
STR 3-134 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAG27194.1
1 327
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,0010
Central domain 33 231 200 0,4815
C-terminal 232 327 95 0,9896
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-231
C-terminal
232-327

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage EL
[NCBI] 		273133 Uroviricota > Caudoviricetes > Chimalliviridae > Elvirus EL >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAG27194.1 [NCBI]
Genbank nucleotide accession
AJ697969 [NCBI]
CDS location
range 105371 -> 106354
strand +
CDS
GTGAAACATAAAGAAACACCCTTTCAACGAGCCAGCAGCGGGCATGTCCTTCAGGTCGGTGACAACGGGTCTTGCCATGTGGGGGATCACGGGACCGCCATCGCTGGAAAAAATAGCGTCGCCACCGCTGCGAACAATGGACACGCTGTTTCTGGAGACTATGGGACAGCCATCGTTGAACGCTTTGGTATCGCCTCTGCCGGAAATAAAGGCATGGCTATCGCCGGAGATTGCGGCAGTGCCACCGCTGGAGATCATGGTATCGCCACCGCGGGAAATTACAGTACGGCTACTGTCGGATACTTAGGTACTGCCACCGCCGGAAAGAAAGGGAAAGCTACCGCTGGAGATTGGGGGACTGCTATCGTTGGACTCGATGGCGTTGCGTCTGCTGGAAAGAATGGAAAGATCCACATCCAGTACTTCGACAGTGAAGCCAATCGTTACCGCACAGCAGTTGGATATATCGGTGAGGACGGTCTCGAACCTGGCGTTCCTTACCAATTGGATGAAAACCACGAGTTCGTAAAGGGAGACATTGCCATGACAAAATTCTCTACAGAGGGCCACGTGACTATACTCTTCCGAGGATTGGGTGTAGGTCTTATCAACGTCCAGGTCGTAAGGGTCACTAAGGGTATAGGACATCCCAAACCCTTTTTCCATATTGAGGGATCTGAAGACAAGGGTTACCGTTTGCTTCATAACGGGAGTGAATGGATTGATCAGGTCTTTGAGGCTAAGAAAGCTGTACTCTTCATTGAGTCCCTCTACCCCCCTGTGACACCCGATAAAGAGACCGTGAAACTTACAGTGCCCGAGGATCAGCAAATCCTGGTTAAAGTACGTCGAGTGAATAAGCTGGCCTTGGATGCTGTTGTGTTCCACATTGACACCCTGGGTGGTGCGTATCAGGTATCCTATACCGAGCAACTGACCCCCGATCTCAATCAGTTGACTCATGTTGAGTTAGTGGTCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
68009fe0d260245068cf2bc178cab713625124052277e3f6c969114977e32a72
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6269
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
[Phenogenetic characterization of a group of giant Phi KZ-like bacteriophages of Pseudomonas aeruginosa] Burkal'tseva,M.V., Krylov,V.N., Pleteneva,E.A., Shaburova,O.V., Krylov,S.V., Volkart,G., Sykilinda,N.N., Kurochkina,L.P. and Mesianzhinov,V.V. 2002 12500672 GenBank
Myoviridae bacteriophages of Pseudomonas aeruginosa: a long and complex evolutionary pathway Krylov,V., Pleteneva,E., Bourkaltseva,M., Shaburova,O., Volckaert,G., Sykilinda,N., Kurochkina,L. and Mesyanzhinov,V. 2003 12798231 GenBank
PHIRE, a deterministic approach to reveal regulatory elements in bacteriophage genomes Lavigne,R., Sun,W.D. and Volckaert,G. 2004 15033869 GenBank
Genome comparison of Pseudomonas aeruginosa large phages Hertveldt,K., Lavigne,R., Pleteneva,E., Sernova,N., Kurochkina,L., Korchevskii,R., Robben,J., Mesyanzhinov,V., Krylov,V.N. and Volckaert,G. 2005 16256135 GenBank