Protein

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Genbank accession
WWQ71640.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,83
Protein sequence
MSFGAKFVGNAGQVIIDQDHPCLHLVASGTYPATNAQIINVLYPSPVQSPFPPFVFFCPNGSHHITMFQHAGSAGNWTGFSFYVKVFRDTSGVVLGGKWKACAVFMPKTGGWGMQIFDNQSRVVFDSNRDLVRFISGTQLLNYYGTNGNYLRYYTLHSWSAPWPHGTDGYFLVSHFNVQAQPPRGDTGECSIGFVTSARNTVVATVQVGGPGQDAIRTPFPWPLLAIA
Physico‐chemical
properties
protein length:228 AA
molecular weight: 24944,96200 Da
isoelectric point:8,70757
aromaticity:0,14474
hydropathy:-0,00921

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWQ71640.1
1 228
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5994
Central domain 11 205 196 0,0003
C-terminal 206 228 22 0,9984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-205
C-terminal
206-228

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Alize
[NCBI] 		3096999 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWQ71640.1 [NCBI]
Genbank nucleotide accession
OR683400 [NCBI]
CDS location
range 36636 -> 37322
strand +
CDS
ATGAGTTTCGGTGCGAAGTTTGTTGGGAATGCCGGTCAGGTGATAATCGATCAGGACCACCCTTGTCTGCATCTGGTTGCGTCTGGTACCTACCCAGCCACTAATGCCCAGATCATCAACGTCTTGTACCCATCTCCGGTGCAGAGCCCGTTCCCGCCGTTCGTTTTCTTTTGCCCTAATGGGTCGCATCACATAACGATGTTCCAGCATGCTGGTTCGGCTGGGAACTGGACGGGTTTCAGCTTCTACGTGAAGGTGTTTCGAGACACAAGCGGTGTCGTACTGGGAGGGAAGTGGAAGGCATGCGCGGTGTTCATGCCGAAAACTGGCGGATGGGGGATGCAAATATTTGACAATCAGTCGAGAGTGGTGTTTGACAGTAATAGGGATCTTGTTCGGTTCATAAGTGGTACCCAGCTGCTGAATTATTACGGCACGAATGGCAATTATCTGAGGTATTACACCCTGCATTCATGGTCAGCGCCGTGGCCGCATGGGACCGATGGGTATTTTCTGGTTAGTCATTTCAATGTACAGGCACAACCGCCCCGAGGTGATACTGGAGAGTGCTCCATTGGGTTTGTTACTTCGGCCCGAAACACAGTTGTAGCAACTGTTCAAGTCGGCGGACCTGGGCAAGACGCAATACGAACACCTTTCCCATGGCCTCTTCTGGCCATTGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4b93486b6ee55703f50d22e5302259a680d3cd10de4a470642174abf8ac6a81d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank