Protein

Genbank accession
YP_006560558.1 [GenBank]
Protein name
head closure Hc3
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGKDFKNADYIDYLPINMLATPKEVLNSSGYLRSFPGIAKRNDVNGVSRGVEYNTAQNAVYRVLGSKLYKGETVVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPADSDYTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTADELATGVMEALRFDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRAIDFMYEGNQIACGDKSEAVTGQLQFDISSQYDKQQEHLLFTPLFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
Physico‐chemical
properties
protein length:461 AA
molecular weight: 51125,85000 Da
isoelectric point:5,76213
aromaticity:0,10846
hydropathy:-0,27570

Domains

Domains [InterPro]
IPR021098
1–461
IPR021098
YP_006560558.1
1 461
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SemP_Emek
[NCBI] 		1168548 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella
[NCBI] 		590 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006560558.1 [NCBI]
Genbank nucleotide accession
NC_018275 [NCBI]
CDS location
range 7438 -> 8823
strand +
CDS
ATGGGTAAAGACTTCAAGAATGCCGACTATATTGATTACCTACCAATCAATATGTTGGCTACACCGAAAGAAGTCCTCAACTCATCGGGTTATTTACGCTCATTCCCCGGCATAGCGAAGCGCAACGATGTAAATGGTGTATCGCGTGGTGTTGAATACAATACCGCGCAGAACGCTGTATATCGCGTTTTAGGCAGCAAGCTCTACAAAGGGGAAACCGTAGTAGGTGATGTTGCCGGAAGCGGTCGCGTATCTATGGCACATGGTCGCACATCACAGGCGGTAGGCGTTAATGGTCAACTGGTCGAGTATCGCTATGATGGCACCGTTAAAACCGTCTCAAACTGGCCTGCAGACAGCGATTACACGCAGTATGAGTTAGGTTCAGTACGTGACATTACTCGCTTACGTGGGCGTTATGCATGGTCAAAAGACGGCACTGATTCATGGTTTATCACTGACCTTGAAGACGAATCGCACCCTGACCGATACAGCGCACAATATCGTGCCGAGTCGCAGCCTGACGGCATCATCGGCATCGGCACATGGCGAGACTTCATTGTCTGCTTTGGTTCATCGACGATTGAATATTTTTCCCTGACTGGTGCAACCACCGCTGGCGCTGCGTTGTATGTCGCACAGCCATCGTTGATGGTACAGAAGGGCATTGCCGGAACATACTGTAAAACGCCATTCGCTGATTCATATGCATTCATCAGTCACCCGGCTACTGGCGCACCTTCCGTCTACATCATCGGGTCAGGGCAGGCTTCACCAATTGCGACGGCCAGTATTGAGAAAATTATCCGCTCATACACGGCTGATGAACTGGCAACCGGGGTGATGGAAGCGTTGAGGTTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTGCTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACAGGTTTATACGACGATGTTTATCGTGCCATCGATTTCATGTACGAAGGAAACCAGATTGCGTGTGGCGACAAGTCAGAAGCGGTGACAGGGCAGTTGCAATTCGACATTAGTAGCCAGTACGACAAGCAGCAAGAACACCTGTTGTTTACACCCCTATTCAAAGCGGACAATGCCAGATGCTTCGACCTCGAAGTTGAATCATCCACTGGTGTTGCTCAATACGCTGACCGCCTGTTCCTGTCTGCAACCACAGACGGAATCAATTACGGTCGCGAACAGATGATTGAGCAGAATGAGCCGTTTGTGTACGACAAGAGAGTTTTATGGAAGCGTGTAGGTCGTATTCGTCGATTAATCGGATTCAAACTGCGGGTAATCACCAAATCACCTGTAACACTATCCGGGTGTCAAATTCGTCTGGAGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2593d5c68cd543c56c06eb2f524cc55db618af7753a90ecb867ac0f1caea2ddc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8619
Evidence 0,8619
Download PDB

Literature

Title Authors Date PMID Source
Genomic characterization of two new Salmonella bacteriophages: vB_SosS_Oslo and vB_SemP_Emek Ho,N., Lingohr,E.J., Villegas,A., Cole,L. and Kropinski,A.M. 2012 — GenBank