Protein

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Genbank accession
QKN88394.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,65
Protein sequence
KYLGAKPSDPTTDNDGNPLQVGATYWNTTEDEQRFWNGAEWDVPSETAIQAANTAVAARDAALIAEAAAEASEQAAAASETNALASEIASAASEAAAATSEANAAASETAAANSASAAATSEANAAASEAAAANSASLALLGGEALSRVAQAVQMGIRRRQYTGSGFAEMGRGSSGVYRNINQGLSAYGDNQYWENAIGLGIGGAGTSRTEHPIAIIGGVEHEIMNVARTQGSEIRLPKAPDGSKTFNPETGAVHKFTSAAGIGTEHEAYTTDFDAFTYLEIDPYETKTDTTVEVSFILAESDGAFRYLFDTNTPTRTYIGVNNSGNLQFSTNIQNLRVNGEPTLTDTLAIVPGREYRVTADIVDEVTIDLLGCRYDTTGKFKGQIWDYWFRTPSSEVPDRNYKNLEYVPASDPVPDNTVSADANGYSSEDWGLDWDKTANNHVDITEVSAWEAHGDFDIEMLVKVDVLPSGTEHIKLISDVLPQVPDAGTTISINPTTKRFWCTYLDESNPASTTVVEANKTYHVMYRRRGTTGEFLVNGEVELSGVDIGSKLVSSIGAGGYGHEMTGALWNVKLTDVTNPGNSRAYPMVLNSPTQPTTTEIEDSAFDKDTAPFYSPDLINESAGVDIQPWIPTTDSWSVKFKTQVDSLEGNNQWFVQQVDGGTAKIIAYIGTGALSFRATDGGNLNKAEDLRIVPGQVHEVELRCVNGTAQFFLDGVASADTWPTPVFEGISSFGYKFSSNNLYGRFWNVEFTDNADDTNSRYYPVIEYDSSAPKTGTAVAQTHTVTASAFSAAADWTHGPLGVFTSDAAKVGGGVTNQFNFIEGQTYTLEYHIVSTLSVAEDVQLRNASIAAGASSPSITIGNGAGTFTGTWTFTAAAEGGSTGIYLRAVDSEIGDTLQIVSLVARSADGEIVGLSAGNEWVQAGTDSLTKATAKNFGGFPWNNTALSTDATVNGETTKVASLLEPSSKAFLEGNGFSVITNRKDFVMIESWTEDLEDLDIVCPYGNVQYYGSESEAGTLGNNAPQSYSAFGEWDTSTHGLNVVWSTLTDSEKAAWAAQPKHKITFDRDTGKFYQERYRVRSIEGVQNDWVHVLPDESNDLRHQWGSSSSSAVVGARGASTSIKDLTSVGDPDKFTYTRSTSKAESERGRFVKHTSTDFPTYAVPLVLVQRMNQGVYHPVLNPYGTASPTVPDSLALINVTDKIDILLRATQYYTMSDLFKQGNVYDSDFIAGRYSDTGSFRSPSSYHGIREGEIVSHNGIYKQQITDLRLNANKQDHARLILEATSSAFSGNTRGFEGVTFTKVFPSVASVTSDYTVVDSSNASAVVAEKTIPGSFDKIPAVDIVGLPERIMATFPEGVTGKWNPDLPAATSKDIKLTRKMVQPFQRVFTSDDGNTWSRDSISYSGSANTVFVGAGESQVLLYYYDAITAFTEPDSSRNMLSEPGRVVYSARHLNDKGNRLCWSTIGKYATSTQHRADGRALLLDYSLNNLGALETNEDYKPQHTPLNLGVPDNDSIAFKALPKLVDVNGLLYVQWHATELQYVDTEFTPWGDNGDFVIENGEDTVVDINGNTVKVVTHVELLPVGITDYTLVR
Physico‐chemical
properties
protein length:1598 AA
molecular weight: 172363,36680 Da
isoelectric point:4,62382
aromaticity:0,09449
hydropathy:-0,32866

Domains

Domains [InterPro]
DC_1387
STR
3–369
DC_1387 IPR013320
DC_1387
STR
489–1598
DC_1387
QKN88394.1
1 1598
Architecture
STR
STR
STR 3-369 | STR 416-1598
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKN88394.1
1 1598
Domain Start End Length (AA) Confidence
N-terminal 1 234 234 0,8954
Central domain 235 487 254 0,6294
C-terminal 488 1598 1110 0,2848
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-234
Central
235-487
C-terminal
488-1598

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValS_X1
[NCBI] 		2736341 Uroviricota > Caudoviricetes > Demerecviridae > Pogseptimavirus VspSw1 >
Host Vibrio alginolyticus NBRC 15630 = ATCC 17749
[NCBI] 		1219076 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
591d0096ba900beacb20a7820e2d3b19106c3f1e853a4594898e9a26c7ef975c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5755
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50