Protein

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Genbank accession
QHZ59597.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGAYAQRGQVVNLPIVFGDGRSRTDFDWITRLPENMLAIARQIKGGNGYMRMMPGLKKVADVAGLSRGSDWNTVSNSAYRVMGGKLYNAGVEVGDVNGEDRTPMAHSRDSQGVVTGNQLLLYRYDGTRKTFSNWPLDSGTGVNNPQFTWGDINDVCHLRQRYIFSVKNSDTFWISSLEDESHPDKIAPFYRAESMPDGIVAIRAWRDYVICFGTASIEFFGLTGDAQNVYANQPSYTVEAGTLGRETVCQYLNSFAFLTSPFVGEYTIALMNPGGGDWSDLASVQVKKILAGYTVAQLQQTRLEAISFESHKLLIVHLPDQTLVYDHPVSQAQGLPVWTIIKTGVQNASGPHRAIDYVNEGNRVTVGDKTLAVLGAFDMTTCAQYGADQEIVLYTPLMPFTGMMLSDFEIDASVGGDSVTSRMWISATEDGSVFGQEILIDYNTPQQWLKRVILHKVGRCRTVVGFKIRTVGATPATLSRARVRVS
Physico‐chemical
properties
protein length:486 AA
molecular weight: 53572,03020 Da
isoelectric point:6,09640
aromaticity:0,09877
hydropathy:-0,16852

Domains

Domains [InterPro]
IPR021098
STR
12–485
IPR021098
QHZ59597.1
1 486
Architecture
STR
STR 12-485 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHZ59597.1
1 486
Domain Start End Length (AA) Confidence
N-terminal 1 95 95 0,6989
Central domain 96 294 200 0,0399
C-terminal 295 486 191 0,4443
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-95
Central
96-294
C-terminal
295-486

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage sortkaff
[NCBI] 		2696445 Uroviricota > Caudoviricetes > Sortsnevirus >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHZ59597.1 [NCBI]
Genbank nucleotide accession
MN850581 [NCBI]
CDS location
range 30935 -> 32395
strand -
CDS
ATGGGAGCTTATGCGCAACGCGGGCAGGTCGTTAACCTGCCGATCGTTTTCGGTGATGGCCGCAGCCGGACGGACTTCGACTGGATCACCCGGCTACCGGAGAACATGCTCGCCATTGCTCGCCAGATTAAGGGCGGTAACGGCTATATGCGCATGATGCCGGGGCTTAAGAAAGTCGCGGACGTGGCGGGCCTGTCCCGTGGCTCCGACTGGAACACGGTTTCGAACTCCGCTTATAGGGTAATGGGCGGCAAGCTGTATAACGCAGGCGTGGAGGTCGGCGACGTCAACGGCGAGGATCGTACTCCTATGGCCCATAGCCGCGATTCTCAGGGCGTCGTGACCGGAAACCAGCTCTTACTCTACCGCTACGACGGGACCCGCAAGACGTTTAGTAACTGGCCGCTGGACTCCGGGACGGGCGTCAACAACCCGCAATTCACCTGGGGCGACATTAACGACGTGTGCCACCTCCGCCAGCGCTACATTTTCAGCGTGAAAAATTCGGACACTTTCTGGATCTCCTCGCTGGAGGACGAGAGCCACCCGGACAAGATCGCGCCGTTCTATCGTGCGGAGTCCATGCCGGACGGCATCGTGGCGATCAGGGCGTGGCGCGATTACGTGATTTGCTTCGGGACCGCCTCGATCGAGTTTTTCGGCCTGACCGGGGACGCCCAGAACGTTTACGCCAATCAGCCATCCTACACCGTCGAGGCCGGGACGCTGGGCCGTGAAACCGTATGCCAGTACCTGAACAGCTTCGCATTTCTTACGTCGCCTTTCGTGGGCGAGTACACGATCGCGCTGATGAACCCCGGCGGCGGAGACTGGTCTGATCTGGCCTCCGTGCAGGTTAAAAAGATTCTGGCCGGGTACACCGTGGCCCAGCTCCAACAAACGCGACTGGAGGCGATCAGCTTTGAAAGCCATAAATTGCTTATTGTCCACTTACCGGATCAAACGCTCGTCTACGATCACCCGGTTAGCCAGGCGCAGGGCCTCCCGGTCTGGACGATCATTAAAACGGGCGTACAAAATGCCAGCGGACCGCACCGCGCGATCGACTACGTTAACGAAGGGAACCGCGTAACGGTCGGAGACAAGACGCTGGCGGTACTGGGCGCGTTTGATATGACCACTTGCGCGCAGTACGGGGCAGACCAGGAGATCGTCCTCTATACGCCGCTGATGCCGTTTACGGGCATGATGTTAAGCGACTTCGAGATCGACGCCAGCGTGGGCGGCGACAGCGTAACGAGCCGGATGTGGATCAGCGCCACGGAGGACGGGAGCGTATTCGGACAGGAGATCCTGATCGACTACAACACGCCGCAGCAGTGGCTAAAACGCGTTATTTTGCACAAGGTCGGACGTTGCCGGACCGTCGTCGGATTCAAGATCCGCACCGTAGGCGCTACGCCTGCCACGCTGTCCCGTGCGCGCGTCCGCGTAAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f1f1bd1245fcc88d01a7ce5ea678be4b2db3c1fa45ee96c13d4f57ed1f676d52
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8499
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank