Protein

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Genbank accession
APD19752.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEITKARTLTYDGEEVYARSHIDVVDGLDKSKLLTDEQKQKLENFNADAIDVATPSKNGLMSAQDKTKLDSLNQFNPDTLTNATTQKAGLMSAEDKRRLDELKTNSNAYDKGLSNATASSSVIAANINKWPNATQTVNLSKKVSECQNGIVLVWRSDTEDDNYHYQYVPKYHVSAHSTTKIVHLIPTNSANEFCTKTVIVKDNVVNGTNDNHNRTTKANKVRLHEILEF
Physico‐chemical
properties
protein length:230 AA
molecular weight: 25631,20320 Da
isoelectric point:6,38310
aromaticity:0,05652
hydropathy:-0,69478

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SpT5
[NCBI] 		1913448 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD19752.1 [NCBI]
Genbank nucleotide accession
KX827368.1 [NCBI]
CDS location
range 4137 -> 4829
strand +
CDS
ATGGCTGAAATTACTAAGGCAAGGACGTTAACATACGATGGCGAAGAGGTTTATGCTAGATCGCACATTGATGTTGTTGACGGTTTAGATAAATCAAAGTTATTAACTGACGAGCAAAAACAAAAACTAGAAAACTTTAATGCGGATGCAATTGATGTTGCAACGCCATCGAAAAATGGTTTGATGTCCGCGCAAGACAAAACTAAACTGGACAGCTTAAACCAGTTCAACCCTGATACACTCACAAATGCGACTACTCAAAAAGCGGGCTTAATGTCCGCTGAAGATAAGCGTCGCCTTGATGAGTTGAAAACAAATTCAAACGCTTACGATAAAGGGTTATCAAATGCAACTGCATCCAGTTCAGTTATTGCAGCAAACATCAACAAATGGCCAAACGCAACTCAAACTGTAAATTTAAGTAAAAAAGTGAGCGAATGCCAAAATGGCATTGTGTTGGTATGGCGTTCTGACACTGAAGATGATAACTACCATTATCAATATGTACCTAAGTATCACGTGTCGGCTCATAGTACAACAAAAATTGTGCATCTAATCCCTACAAATTCCGCGAATGAATTTTGTACAAAAACAGTCATAGTAAAAGATAATGTCGTTAATGGTACGAATGACAACCATAATAGGACAACCAAAGCAAACAAAGTACGCTTACATGAAATTTTAGAATTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
90aac5a08ea053b599f0369137c8ff06776f11e893abf7ed45ebf2cc93d2e47d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8242
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-genome sequencing of Staphylococcus pseudintermedius phages Breteau,M., Kot,W., Vogensen,F.K., Moodley,A., Wellington,E.M.H. and Hodgson,D.A. — — GenBank