Protein

Genbank accession
YP_009595668.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MSITRTNTLADVNGNNSINVSELASKVVMSAPEGASKIGYGNRTQEQKNGDVLSVRDYITTAVNGVTSNQAGIVAAVAAAKSSGASLHWPAGTYVSTASIPDFHSVRHTGPGVVKRGTNLFSISQFDSAMNTLFVSTSGLTTNDGLSSTEAMLSPNAAVNLWGAKYAATACGPWKIKIAAGTYFESIIAQGYQSNKEIFLEGEYDAVNQVPLTIMDGSVGATNSGIIFTTYGWVNCKWILCQNFTTVGAGGFNIGNYGRMTIDTCHAYNNNLVGFSAAQAADLRIIGRCYIKPSANGTGVTYYRQCTGSWSDATGEIIIDGFNNAATTGVLVRDNSYVVAGCKLTVRNCTSQAVWLRRHSYLEVRDYEITNNNIAFDLRDLSLLAPNGGTQVLTGNTQDYAYKNFSLPWDTASNMAIGADGPSVQAPSAGNYALVVSGKSQVGQQFLTDASTSTINIDFNKKGSLVYAQTDNTLRIALNSADAYRFAASVFYPTVDNAKTLGGSSFRWSTIYAGTSTINTSDETAKQQIKPIDDACLRAWANVEYVQYKFNDAVEAKGDGARWHFGLIAQRVKKAFEDEGLNAFDYGLLCYDEWDEQPEEVDEEGNIIQAYLAAGSRYGIRYEEALALECAYLRSLLKK
Physico‐chemical
properties
protein length:639 AA
molecular weight: 68852,91380 Da
isoelectric point:5,28883
aromaticity:0,10172
hydropathy:-0,17199

Domains

Domains [InterPro]
IPR018247
11–23
IPR018247 IPR011050 IPR012334 IPR030392
SSF69349
467–520
SSF69349 cd10144
IPR024430
469–520
IPR024430 IPR030392
IPR036388
522–639
IPR036388
YP_009595668.1
1 639
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage pf16
[NCBI] 		1815630 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009595668.1 [NCBI]
Genbank nucleotide accession
NC_041881.1 [NCBI]
CDS location
range 146702 -> 148621
strand +
CDS
ATGTCAATCACCAGAACTAACACGTTGGCTGATGTGAATGGTAACAACTCCATTAATGTCAGCGAACTGGCGAGTAAAGTCGTCATGAGTGCGCCTGAAGGTGCATCAAAGATCGGGTACGGCAATCGAACTCAAGAGCAAAAGAACGGTGACGTACTCTCAGTTCGTGATTATATCACAACCGCAGTCAACGGCGTGACCAGCAACCAGGCGGGCATTGTTGCAGCCGTTGCAGCTGCTAAGTCTTCAGGAGCAAGTCTCCATTGGCCTGCCGGCACATATGTGTCCACCGCAAGTATTCCTGACTTCCACTCAGTTCGCCACACAGGTCCTGGCGTTGTAAAACGCGGTACAAACCTGTTCAGCATCAGTCAGTTTGACTCAGCAATGAACACGCTGTTCGTTAGCACTTCCGGGTTGACTACCAATGACGGCCTTTCATCGACTGAGGCAATGCTTAGCCCTAACGCTGCCGTTAACCTGTGGGGTGCAAAGTACGCTGCAACTGCATGCGGGCCATGGAAAATCAAAATCGCAGCAGGTACCTACTTTGAGAGTATCATTGCTCAAGGGTACCAGTCAAACAAAGAGATTTTCCTTGAGGGTGAGTATGACGCAGTCAACCAGGTCCCACTCACGATCATGGATGGCTCTGTTGGAGCGACAAACAGTGGGATCATCTTCACTACCTACGGGTGGGTGAACTGCAAATGGATACTTTGCCAAAACTTCACTACCGTTGGCGCAGGCGGTTTCAACATCGGCAACTATGGTCGCATGACTATTGACACTTGCCATGCGTACAACAACAACCTGGTTGGCTTCAGTGCAGCTCAAGCAGCTGACTTGCGCATCATTGGTCGTTGCTATATCAAGCCGTCAGCAAACGGCACTGGTGTTACCTACTACCGGCAGTGCACAGGTAGCTGGTCTGATGCCACGGGTGAGATCATTATCGATGGTTTCAACAACGCAGCGACCACTGGTGTTCTGGTTCGTGACAACTCGTATGTGGTTGCAGGGTGCAAACTGACGGTCCGGAACTGCACATCGCAAGCAGTTTGGTTGCGTCGCCATTCGTACCTTGAAGTGCGTGATTACGAGATCACCAACAACAACATCGCGTTCGACCTGCGTGACTTGTCCCTGCTTGCACCAAACGGCGGCACTCAAGTTCTGACGGGCAACACTCAAGATTATGCTTACAAGAACTTCTCACTGCCATGGGACACTGCTTCAAACATGGCTATTGGTGCAGATGGTCCATCTGTTCAAGCACCTTCTGCTGGTAACTACGCACTGGTAGTTTCAGGCAAAAGCCAAGTGGGCCAACAGTTCCTGACTGATGCATCAACTTCAACGATCAACATTGATTTCAACAAGAAAGGCAGTTTGGTCTACGCGCAAACTGACAACACTTTGCGGATTGCGCTTAACAGTGCAGACGCTTATCGCTTTGCAGCTTCAGTGTTCTACCCTACTGTTGACAACGCAAAAACACTGGGTGGTTCATCATTCAGGTGGTCAACCATCTACGCCGGTACTAGTACTATCAACACCTCGGATGAAACCGCTAAGCAGCAGATCAAGCCGATTGACGACGCGTGTCTGCGCGCATGGGCCAACGTTGAATACGTCCAGTACAAATTCAACGACGCAGTTGAAGCAAAGGGCGATGGTGCTCGTTGGCACTTCGGTCTGATTGCTCAGCGCGTCAAGAAGGCGTTTGAGGATGAAGGTCTCAATGCGTTCGACTACGGTCTGCTCTGCTATGACGAGTGGGACGAACAGCCGGAAGAGGTTGACGAAGAAGGTAACATCATCCAAGCATACCTTGCAGCGGGCAGCCGTTACGGCATCCGTTACGAGGAAGCGCTTGCACTTGAGTGCGCCTATCTGCGTAGTCTGTTGAAGAAGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
de5625d6b54a08f2d4b46553735502e8054b5385711a911ec4436011c7df7400
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7848
Evidence 0,7848
Download PDB

Literature

Title Authors Date PMID Source
Characterisation of pf16 and phiPMW: Two novel phages infecting Pseudomonas putida PpG1 Magill,D.J., Krylov,V.N., Shaburova,O.V., Allen,C.C.R., McGrath,J.W., Quinn,J.P. and Kulakov,L.A. 2017-09-06 — GenBank