Protein

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Genbank accession
UPW36303.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAVGEIQISALPQAALPIDLSDIFHLKQGIEDKRCTLEQLLAPHSSLRNNPHGVTKTQIGLDNVINALQLVAANNLSDITNVDEARANLQIMSSEEVNSLVQQHINDKSNPHNTTKAQVGLSNVQNWTTSNLYNEDADKYATARAVNNLYKAIQASYPVGTLHLSMNSANPATYLICGGTWELVSKGRALVGYSDNSRPVGSNFGSSSVSLSSNNLPSHSHSIYLTGGGHTHGATIAIDSFDYGTKGTSSFDYGTKNTNTTGNHSHSVSGSTNTTGNHQHSVGGRYGGDSIGGKQRVQVSGTNQISSVAGDHSHTISGSTNTVGNHYHSVAIGAHSHTVGIGAHTHKGTVTLQSSEHTHSGTTGATGAGQAFSVEQPSFVVYVWQRTA
Physico‐chemical
properties
protein length:388 AA
molecular weight: 40858,13090 Da
isoelectric point:6,65001
aromaticity:0,05412
hydropathy:-0,41521

Domains

Domains [InterPro]
DC_1039
STR
1–388
DC_1039
IPR051934
Unmapped
102–353
IPR051934
IPR053827
ATT
154–264
IPR053827
UPW36303.1
1 388
Architecture
STR
ATT
STR
STR 1-153 | ATT 154-264 | STR 265-388
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW36303.1
1 388
Domain Start End Length (AA) Confidence
N-terminal 1 211 211 0,6669
Central domain 212 377 167 0,1037
C-terminal 378 388 10 0,9973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-211
Central
212-377
C-terminal
378-388

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage OPT-SAL01
[NCBI] 		2939134 Uroviricota > Caudoviricetes > Andersonviridae > Felixounavirus > Felixounavirus OPTSAL01
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW36303.1 [NCBI]
Genbank nucleotide accession
ON239128.1 [NCBI]
CDS location
range 65428 -> 66594
strand -
CDS
ATGGCAGTAGGTGAAATTCAAATTAGTGCCTTGCCTCAAGCAGCCTTACCAATTGACCTTAGTGATATCTTCCATCTTAAGCAGGGTATTGAGGATAAGAGATGCACTCTTGAGCAACTACTTGCTCCACACTCAAGCCTAAGAAACAACCCTCATGGTGTTACTAAGACACAGATTGGTTTAGATAATGTTATTAATGCTCTTCAGTTAGTTGCTGCAAATAACTTATCAGACATTACTAATGTTGATGAGGCAAGAGCAAATCTACAGATTATGTCTTCAGAAGAGGTTAATAGTCTTGTTCAACAGCATATTAATGATAAGAGTAACCCACATAACACAACTAAGGCACAGGTTGGTTTAAGTAATGTTCAGAACTGGACAACATCTAACCTTTATAATGAAGATGCAGATAAATATGCTACAGCAAGAGCAGTAAATAACTTGTACAAGGCTATTCAGGCTTCTTACCCTGTTGGTACATTGCATCTTTCGATGAACTCTGCTAACCCAGCTACCTACCTAATTTGTGGAGGTACTTGGGAGTTGGTGTCAAAAGGTCGGGCATTAGTAGGCTACAGTGATAACTCAAGGCCAGTTGGTAGTAACTTTGGCTCTAGTAGTGTTAGCTTATCTAGCAACAATTTACCATCACACAGTCATTCTATCTACCTAACTGGTGGTGGTCATACACATGGTGCTACCATTGCTATTGATAGTTTTGATTATGGTACTAAGGGCACAAGTAGTTTCGACTATGGAACAAAAAACACTAATACTACAGGGAATCACTCACACTCAGTCAGTGGTTCTACCAATACCACTGGTAACCACCAGCATAGTGTAGGTGGACGTTACGGTGGTGACTCTATCGGTGGTAAACAGCGTGTTCAGGTATCAGGAACAAACCAGATTTCAAGTGTTGCTGGTGACCACTCCCACACTATTAGTGGCTCAACTAATACAGTTGGTAACCACTACCACAGTGTTGCAATCGGTGCTCACAGTCATACAGTTGGGATTGGTGCTCATACACACAAAGGTACAGTAACTTTGCAGTCATCTGAACATACTCACTCAGGTACTACAGGTGCTACTGGTGCTGGTCAAGCATTTAGTGTTGAACAGCCATCCTTTGTAGTTTATGTATGGCAAAGAACCGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c24015a7d6ea124e532289b1fa6736eb1fcecf4e2b95946a7d146210c657f1fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7071
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Salmonella enterica Bacteriophage OPT-SAL01 Kim,D., Kim,Y., Seo,R., Lee,S.-M. and Kim,J. 2012-01-15 — GenBank