Protein

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Genbank accession
QGZ17764.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MADFLGTRDSNVALSEDNVGRKVLILDTITQFDSGVGNIESAEGVFDLGGTDSTSNPTNFNSNIQSSGFYTFANTISLDAIYDVNLGVVIGMTSEDEYDLFDSGRGATLFEDAKAPFDGSPEVQAGAEIQVGASDSSLASITSFQKIAQQSTIKGRYFKFRCKITSDNNKVRAKVHTLQYKVNFEVRTESGEDVVASASGQAITFTNSFYATPSIGISAQGLQTGDYYQITSKSKTGFTIRFYNSSNTGISRTFDYQVFGYGLKS
Physico‐chemical
properties
protein length:265 AA
molecular weight: 28611,07220 Da
isoelectric point:4,65713
aromaticity:0,11321
hydropathy:-0,26830

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC026P
[NCBI] 		2686456 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17764.1 [NCBI]
Genbank nucleotide accession
MN698240.1 [NCBI]
CDS location
range 23960 -> 24757
strand +
CDS
ATGGCAGATTTTTTAGGAACAAGAGATAGTAATGTTGCGTTATCAGAAGATAATGTTGGTAGAAAAGTTTTAATATTAGATACAATAACACAATTTGATAGTGGTGTTGGTAACATAGAATCAGCAGAGGGTGTGTTTGATCTTGGTGGAACAGACTCTACTTCCAATCCAACTAACTTTAATTCTAATATACAATCATCAGGATTTTACACATTTGCTAATACTATAAGTTTAGATGCAATTTATGATGTAAATTTAGGTGTTGTTATTGGTATGACATCAGAAGATGAGTACGATTTATTTGATTCAGGTAGGGGTGCAACTTTATTTGAAGATGCTAAAGCACCTTTTGATGGTAGCCCTGAAGTTCAAGCTGGAGCAGAAATACAGGTAGGAGCAAGTGACAGCAGTTTAGCAAGTATTACAAGCTTTCAAAAGATAGCACAGCAAAGCACAATAAAAGGTAGATATTTTAAATTTAGATGTAAGATAACTAGCGATAATAACAAGGTTAGAGCAAAAGTTCATACTCTACAATACAAAGTAAATTTTGAAGTAAGAACTGAGTCAGGAGAAGATGTTGTTGCATCAGCTTCAGGTCAGGCAATTACATTTACAAATTCTTTTTACGCAACTCCAAGTATCGGTATTTCTGCACAAGGATTGCAAACAGGAGACTATTATCAGATCACAAGTAAATCTAAAACAGGCTTTACAATAAGGTTTTATAATAGTAGTAATACAGGAATAAGCCGAACATTTGATTATCAAGTGTTTGGATATGGGTTGAAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
22ad25ad18d0758862d984c24c4e514bb7c151fecda1813c3b35ed51a8a5a9b1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9175
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank