Protein

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Genbank accession
WAX24361.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAQQVVNVGAVANDGTGDALRTAFQKLNANDTELYSITGSHTATLATYGTAATKNVGTAAGNVPVLDGSGLLDTAVLPALAITDVFTVASQAAMLALAAQKGDIAIRSDLNKSFALSTNSPATLADWKELLTPTDAVLAVAGLTGSISAAALKTALALVKGDVGLGNVDNVSVAAAPTDYTPSLTSDTGDFTTATATGTYKKHPDGYFDLHAEITITNKGAADGTVKVGLPAGITPAARVSGFGVDFGTGTILRVTGGIGAGTVNIVNFDLTSAARNNVNPLVIDIRFKAS
Physico‐chemical
properties
protein length:291 AA
molecular weight: 29209,49100 Da
isoelectric point:4,92683
aromaticity:0,05155
hydropathy:0,25601

Domains

Domains [InterPro]
IPR036240
STR
2–61
IPR036240
DC_1036
STR
2–286
DC_1036
IPR008987
ATT
4–69
IPR008987
WAX24361.1
1 291
Architecture
ATT
STR
ATT 2-69 | STR 70-286 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bradyrhizobium phage ppBeUSDA76-1
[NCBI] 		3003363 No lineage information
Host Bradyrhizobium elkanii USDA 76
[NCBI] 		398525 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Nitrobacteraceae > Bradyrhizobium > Bradyrhizobium elkanii USDA 76

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAX24361.1 [NCBI]
Genbank nucleotide accession
OP596613 [NCBI]
CDS location
range 32838 -> 33713
strand +
CDS
ATGGCACAGCAAGTCGTGAATGTCGGCGCCGTGGCCAATGACGGCACCGGCGATGCTCTCCGGACTGCGTTCCAGAAGCTCAACGCGAACGATACCGAGCTCTATTCGATCACGGGGTCACACACCGCGACGCTCGCGACCTATGGCACGGCCGCGACCAAGAATGTCGGAACGGCCGCCGGCAATGTGCCCGTGCTCGACGGCAGCGGCTTGCTCGATACGGCGGTCCTGCCGGCGCTCGCGATCACTGACGTCTTTACGGTCGCCTCGCAGGCCGCAATGTTGGCACTCGCCGCGCAAAAGGGCGACATCGCGATCAGGTCGGACCTGAACAAGTCGTTTGCCTTGTCGACCAATTCGCCGGCGACGCTCGCGGACTGGAAAGAGCTGCTGACGCCGACAGATGCGGTCCTCGCCGTCGCCGGCTTGACCGGCTCGATCAGTGCTGCGGCCCTCAAGACGGCGCTGGCGCTGGTTAAGGGCGACGTCGGCCTCGGCAACGTCGATAACGTCAGCGTCGCAGCGGCGCCGACCGATTATACGCCGAGCCTGACAAGCGACACGGGCGATTTCACGACGGCCACGGCGACCGGCACCTATAAGAAACATCCGGACGGATATTTCGACCTTCACGCCGAGATCACGATCACGAACAAAGGGGCGGCTGACGGTACGGTGAAGGTCGGCCTTCCTGCCGGCATCACGCCGGCGGCCAGGGTTTCGGGATTTGGCGTCGATTTTGGTACGGGCACCATTTTGCGCGTCACCGGCGGAATCGGAGCCGGCACGGTCAACATCGTCAATTTCGATCTCACGAGTGCGGCCAGAAACAACGTCAATCCGCTCGTGATCGATATCCGCTTCAAGGCCAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ced5d4027d678bd6ca619a30f2eaa08f7f5da993cbb091becdf773c5f36ea224
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8436
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Spontaneously produced lysogenic phages are an important component of the soybean Bradyrhizobium mobilome Joglekar,P., Ferrell,B.D., Jarvis,T., Haramoto,K., Place,N., Dums,J.T., Polson,S.W., Wommack,K.E. and Fuhrmann,J.J. — — GenBank