Protein

View in Explore
Genbank accession
QZI81345.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MATVTVIPSDITKLKNDVSTLKQDVAGKASTTDVDNKLKLYLKQTDLSSELGSGRYSGSFYPLTGKDAFYLFNLNTTAQSANLWLDPNAGVSQVLRSTSSSRYKRSVESVIDEYADLMLEMRPVWYRSTCESDRKDWGWYGLIAEEVGEIAPEYVHWRPLQEGEDPAIASSNGMVAEGVMYDRLTVPLIHHVKKLKAENDEMRKEIDELKAVVAALVNKPTTLD
Physico‐chemical
properties
protein length:224 AA
molecular weight: 25043,00380 Da
isoelectric point:5,11854
aromaticity:0,08036
hydropathy:-0,39554

Domains

Domains [InterPro]
DC_0536
STR
7–224
DC_0536
IPR030392
CHP
99–206
IPR030392
Coil
Unmapped
192–219
Coil
QZI81345.1
1 224
Architecture
STR
STR 7-224
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-G3B1
[NCBI] 		2865810 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI81345.1 [NCBI]
Genbank nucleotide accession
MZ234033.1 [NCBI]
CDS location
range 31548 -> 32222
strand -
CDS
ATGGCTACAGTCACTGTTATACCTAGTGATATAACGAAGCTGAAAAATGACGTTTCAACACTAAAACAGGATGTTGCAGGAAAAGCATCAACTACTGATGTTGACAATAAGTTGAAGTTGTATCTAAAACAAACTGATCTATCATCCGAGTTGGGTAGCGGAAGGTATAGTGGGAGTTTTTACCCCCTAACTGGTAAAGATGCATTTTATTTATTTAATCTTAACACAACCGCTCAATCAGCAAACTTATGGCTTGATCCAAATGCTGGAGTTTCGCAAGTTTTACGCTCCACTTCCTCTTCTCGTTATAAGCGCAGCGTAGAATCGGTTATTGATGAATATGCGGATCTGATGCTTGAAATGCGTCCTGTTTGGTATCGGTCAACTTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGGCTAATCGCGGAAGAGGTTGGAGAAATTGCGCCGGAGTACGTTCACTGGCGACCGCTGCAAGAAGGAGAAGATCCTGCCATTGCTTCAAGTAATGGCATGGTGGCGGAAGGCGTTATGTATGACCGCCTCACTGTTCCACTGATTCACCACGTTAAGAAACTGAAAGCGGAAAACGATGAGATGAGAAAAGAAATTGACGAGCTAAAAGCGGTTGTAGCGGCACTGGTAAACAAACCAACCACGTTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d47067ddf33352af16c665af6688e91b2de5c533660095a34bd305d26a86f463
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7925
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank