Protein

View in Explore
Genbank accession
AUS01343.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSLNDLLGASTQSDAGTGVTETGAVVIGSTVAGEPTNIKSSDGSNVVTVSDDKKLTVNDSQKIAEIVNAINVSADNNDEKLPTVEAVIAFLAGAVTAAIDFKEFTSKSAFDAFITAGGFVPTIAFVTDATPFDYTDDTGHTGTDLTWMFVVCVEESGVVTTSMINNSDISSLTGDEIAAIISSTEDVNFVNDSDLSRIRNLPDNTTDALGGKVNTEAGKGLSQNNFTDTQRNKVDNSPTDTNAALNAKLDKQSSGVNVRVTNPGTGNGSYQLQNTLADANEKLWRIIAKSDGSMTIDALEDDGVTVTETFEFNQAGVLSAKTLKQNTYSVVDTNDPMYVLISALLNGTMTQDMVLQSDSNSALTLKVPDNADSPGIAWQNTGESYTLTIEREVVGSFGADMVFRAGRDNDTSLIPEAMRIRGTEDGTAGTRGDVIVRQTLRADSVASTEEATARGQTLMHRRNFGLNREQLAYKSNFPSLSDSAIADWFTRGAIVYFFGVGSGTVNMPEIVDSDPTINQVVVGTEIELVNQNSGSAITFARHDTGQTFVDRDVSSTASTYQLGASSRIKLAAVNLNAYSAIGKYCWVISA
Physico‐chemical
properties
protein length:591 AA
molecular weight: 62661,31480 Da
isoelectric point:4,33167
aromaticity:0,06261
hydropathy:-0,19120

Domains

Domains [InterPro]
DC_1916
STR
10–590
DC_1916
AUS01343.1
1 591
Architecture
STR
STR 10-590 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.284.A._10N.286.55.A5
[NCBI] 		1881279 No lineage information
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS01343.1 [NCBI]
Genbank nucleotide accession
MG592654.1 [NCBI]
CDS location
range 10802 -> 12577
strand +
CDS
ATGAGTAGTTTAAATGACCTACTAGGCGCATCAACGCAAAGTGATGCAGGTACAGGCGTTACGGAAACTGGTGCGGTTGTAATTGGATCGACTGTTGCGGGCGAGCCTACAAATATCAAGTCTAGTGATGGATCTAATGTCGTTACCGTGAGTGATGATAAAAAACTTACGGTAAATGACAGTCAAAAGATCGCAGAAATCGTAAACGCGATCAATGTAAGTGCTGACAACAACGATGAGAAACTGCCCACTGTGGAAGCTGTCATCGCGTTTTTGGCGGGGGCTGTAACGGCTGCAATTGACTTCAAAGAGTTTACAAGTAAGTCGGCGTTTGACGCGTTTATCACAGCGGGTGGGTTTGTTCCTACCATTGCCTTTGTGACTGATGCGACACCTTTCGATTACACTGATGATACTGGCCATACAGGTACAGACTTGACATGGATGTTTGTTGTATGTGTTGAAGAAAGCGGAGTTGTCACAACTTCGATGATTAACAATAGTGATATTTCAAGCCTGACGGGTGATGAGATTGCAGCTATCATTTCATCAACTGAAGATGTTAACTTTGTTAATGATTCTGATTTATCGCGCATTAGAAACCTTCCAGACAACACGACAGACGCTCTAGGCGGTAAGGTAAACACTGAGGCGGGTAAGGGTCTGTCACAGAATAACTTTACCGACACTCAGCGTAACAAAGTAGATAACTCGCCTACCGATACGAACGCAGCTCTTAACGCTAAGTTAGACAAGCAAAGCTCAGGCGTTAATGTGCGCGTAACCAATCCCGGCACTGGTAACGGGTCGTATCAACTACAAAATACTTTAGCCGACGCCAATGAAAAACTATGGCGTATCATTGCTAAGTCTGACGGCTCCATGACCATTGATGCGCTTGAGGATGATGGGGTTACAGTCACTGAAACGTTTGAGTTTAATCAAGCAGGCGTGTTGAGTGCCAAGACCCTAAAACAAAACACCTACTCGGTTGTCGACACTAACGACCCAATGTACGTGCTTATATCTGCATTACTTAACGGGACTATGACTCAAGACATGGTGTTACAGTCTGACAGCAACTCAGCATTGACGCTTAAAGTGCCGGACAATGCTGACAGTCCTGGTATTGCTTGGCAGAATACGGGCGAATCGTACACGCTAACTATTGAACGTGAAGTGGTGGGGTCGTTTGGTGCTGACATGGTGTTTCGTGCGGGTCGTGATAACGATACGTCGCTGATACCTGAAGCTATGCGTATTCGTGGGACTGAAGACGGTACGGCGGGAACGCGTGGTGATGTTATTGTTCGTCAGACATTACGCGCTGATTCTGTTGCGTCAACTGAAGAAGCTACGGCGCGTGGTCAGACTCTTATGCACAGAAGAAACTTTGGGCTGAATCGCGAACAACTTGCGTACAAGTCAAACTTCCCTAGCCTTAGTGACTCTGCCATCGCTGACTGGTTTACTCGCGGTGCGATTGTTTACTTCTTTGGCGTTGGTTCTGGAACTGTCAATATGCCGGAAATTGTTGATAGTGACCCAACCATTAACCAAGTTGTAGTGGGTACGGAAATCGAACTAGTGAATCAAAACTCTGGGTCGGCTATCACTTTTGCTCGACACGATACGGGTCAAACATTTGTCGATCGCGATGTCAGCTCAACAGCCAGTACGTATCAGCTTGGTGCGTCTAGTCGAATAAAGCTCGCAGCAGTTAACTTGAACGCATACTCAGCAATTGGAAAGTATTGCTGGGTGATTTCCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
32f89bea32208e1981ab3c9189a8377bda0d931301c88450ce7435633a89a1a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6126
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank