Protein

View in Explore
Genbank accession
WPJ56887.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,61
Protein sequence
MLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWEGTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTVVNSGNDPYFIATAGQTSLQTASIAGLTYILNTEMAPVTAVDNTGRIDPSTTGFFYVKAAAFQKRWEVTVTWSGGSVTGYYNVPDASSGTESAEWASASFVINALINGDPNGYGIGAAITAAGGTVVGFGAYMYIAGLPNLVVSTSSGDMYAVASGQSRVPQEQDLPAQLPAEADGAMCRVGAASSETAWYQFNYSERTWYEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFIENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSGGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQGGVFTVPAVLRPVGWADNYKEELILTYLPSNPMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLATITVPCRTNADTTEVSLFTDGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:782 AA
molecular weight: 85245,76460 Da
isoelectric point:5,10030
aromaticity:0,09079
hydropathy:-0,19680

Domains

Domains [InterPro]
IPR058003
TTP
1–782
IPR058003
WPJ56887.1
1 782
Architecture
TTP
TTP 1-782
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ56887.1
1 782
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,9924
Central domain 133 333 202 0,1676
C-terminal 334 782 448 0,0967
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-333
C-terminal
334-782

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage RCIP0110
[NCBI] 		3094278 Viruses > unclassified bacterial viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ56887.1 [NCBI]
Genbank nucleotide accession
OR532904 [NCBI]
CDS location
range 32545 -> 34893
strand +
CDS
TTGCTGCAGGGGGTCTCCCAGCAGGTTCCAAGAGAGCGCCAGCCCGGGCAGCTGGGGGCGCAGCTGAACATGCTAAGCGACCCGGTTTCTGGTATCCGCCGCAGACCTCCAGGTGAGATTGTCTGGGAGGGTACGATTGATAATCCGGGGCTTGACTCCCTGTTCACTGAATACGTCGAGCGTGGCACTGACGGTAGGCACCTGCTGATTAACACCAGCAACGGTAACTGGTGGCTGCTGGCTAAGAATGGAAAGACCGTCGTTAACTCGGGCAACGACCCGTACTTTATTGCAACAGCAGGGCAGACCTCCTTGCAGACCGCCAGCATTGCGGGGCTGACTTATATTTTAAACACGGAGATGGCTCCGGTCACTGCCGTGGACAATACTGGGCGTATTGACCCCAGCACTACTGGATTCTTCTACGTCAAGGCTGCGGCTTTCCAGAAGCGTTGGGAGGTTACGGTGACTTGGTCGGGGGGATCCGTCACAGGGTACTATAACGTACCTGACGCCAGTAGTGGCACAGAGTCAGCAGAGTGGGCATCTGCGTCATTCGTGATAAACGCACTTATTAATGGAGACCCTAACGGGTATGGTATAGGTGCGGCTATCACAGCGGCTGGGGGTACAGTAGTCGGCTTTGGGGCGTACATGTACATAGCCGGGCTACCTAATTTAGTAGTGAGTACGTCTTCTGGTGATATGTATGCAGTGGCGTCAGGGCAGAGCAGGGTTCCCCAGGAACAGGACCTGCCTGCACAGCTCCCCGCAGAAGCCGATGGGGCAATGTGCCGAGTAGGTGCGGCCTCGTCGGAGACTGCATGGTATCAGTTCAATTACAGCGAACGTACCTGGTATGAGGTTGGGGCATACGGCAGTATCACCAAGATTACGAATATGCCCAGAGAGCTTGCTGCGGACGACAACATTATTGCGCGGGATTGGGAGGGGCGCTTAGCAGGTAACGACGATAATAACAGCAATCCCGGTTTCATAGAGAATGGCTACATCACTGGTATCGCAGCTTTTCAGGGCCGCCTGGTCCTGCTTAGTGGTAGCTCCGTGGATATGTCGGCCTCTGGCCTGTATCAGCGCTTCTATCGTTCTACCGTGACATCTCTGCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCTGCGCAGGATTCTGTGTACCGCACCGCTGTGCAGTTCAACCGAGACCTGGTCCTATTCGCTAACAGCATGCAGGCTGTTGTGCCGGGCTCTGCAGTGCTTACGCCCACCAACGCAAGCATTAGCATTACCAGCACCTACGATTGTGACAGCCGTGTTACCCCGGTAATGGCTGGGCAGACAGTAATATACCCGAACAAGCGCAACGACAGCTACGCTGGTATTCTGGAGCTAATCCCATCGCCTTACACCGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGTAATAGTCTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGGCGGCGCGAAGATGCAGGCGGCGTGGCATAAGTGGTCGTTCCCGTATCCAATCCTGAGTGTACAGGCGCTGGAGGATGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCCAGCAACAAGCTTTTGATTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTGGGCTCAGAATACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTGCAGGGCGGAGTGTTCACTGTTCCGGCGGTATTGCGCCCGGTTGGGTGGGCGGACAACTACAAGGAAGAGCTTATCCTAACGTACTTACCCAGCAACCCTATGGGGCCTACTGAGGTTGGCATCAAGGAGATTGCCGGGGAGAACACCCTACGGGTTGTGCGCGGCGTACCTGATGGCACTTATGTAATCGGGAGACGTTACCGTAGTACGTTCACGCTAACTACGCCTATTCTACGGGACCAGAATGACAAGCTCGTGGGAAGTGGGCATGTGCGCCTGCTGCGTCTGGACGTGGCAGTACGTAACTCTGGGCACTTCGACGTACAGGTACTAGACACCCCGCGGGACGTTAATTGGGGTGGAGAACTAACCGGTATCCTGATGAACTCAAAGGAGCTGACGCTTGGGCAGGCCCTGCGTATGGACCTGGCTACGATTACCGTGCCATGTCGTACCAACGCAGACACAACCGAGGTGTCACTATTTACTGACGGTTCTATGGAACTGAACGTGCTGGATATCTCGTACATCCTGCGCTACAACCAACGCAGGCGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d53d447638f5e9aff1c057fe46569dca0866424bcfd00e5b860f2041f37d53b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3044
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50