Protein

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Genbank accession
ANA49273.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MNIDFGQTITLETAKKERDDQIRVLISGRRYEKEIKGITFNGTKFSTDRQSQSMLTGAAVSAMLDPSYSVKWKTSAGFVQLSSSEVIAAAQAVRAHVQACFDREAELTTALEDGTYLSSMLDEGWPE
Physico‐chemical
properties
protein length:127 AA
molecular weight: 14031,58460 Da
isoelectric point:5,04204
aromaticity:0,07874
hydropathy:-0,34724

Domains

Domains [InterPro]
DC_2197
STR
3–125
DC_2197
IPR025484
STR
25–113
IPR025484
ANA49273.1
1 127
Architecture
STR
STR 3-125 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPMW
[NCBI] 		1815582 Uroviricota > Caudoviricetes > Plaisancevirus >
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANA49273.1 [NCBI]
Genbank nucleotide accession
KU862660.1 [NCBI]
CDS location
range 70601 -> 70984
strand +
CDS
ATGAACATTGACTTCGGACAAACAATTACGCTTGAGACAGCAAAGAAAGAACGTGACGATCAAATCCGAGTTCTGATTTCTGGAAGGCGATATGAAAAGGAAATCAAGGGTATCACATTCAATGGTACTAAGTTCAGTACCGATCGTCAAAGCCAGTCAATGCTCACAGGTGCTGCTGTAAGTGCAATGCTTGACCCATCTTACTCTGTGAAGTGGAAGACTAGTGCTGGTTTTGTTCAGCTTAGTTCGTCTGAGGTTATTGCTGCTGCTCAGGCTGTTAGAGCACATGTTCAGGCGTGTTTTGATCGTGAAGCTGAATTGACTACGGCACTTGAGGATGGGACTTACTTGAGTTCAATGCTTGATGAAGGCTGGCCTGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1bc97aef9564a7ba0b882a38741f8e1ce3b4a19a91b153ec0d53571bea81a40e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8929
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of pf16 and phiPMW: Two novel phages infecting Pseudomonas putida PpG1 Magill,D.J., Krylov,V.N., Allen,C.C.R., McGrath,J.W., Quinn,J.P. and Kulakov,L.A. 2017-09-06 — GenBank