Protein

View in Explore
Genbank accession
QDP42968.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNLFRDNLYDNFPDPRELIKNEIGDKTSLPQWLQASLREVVQRHEEYLKQVGVNIKQPPFNAVGDGVADDTKAINDALASLKDGAILLIPGGYTFRISSTVPVNKRCMLTGGGKIINSDGMNTSYHFEVTADNTSFHKLVMDNPKMLKSQTGNRQGAINIKANYVSVTGCTFYRMLQGISQASSGEFVGAIVANNYFLEHIGAGDGATNDTSNYGEDRGDAVTLWGAGSMIIGNYAQCMAGQDARIAFHAEGYAVNIPTPNPAKDNKDFIIANNIAVGSFRRHFVFEDLFNGVISNNVSYGGATWWSLCIVQAKNCRFDNNILHFTREATDKSGAKWAPVYAAVVMMNYSEGVTLSNNQIYMADNAAGKAFHSQTLNTGVHTNTRIVGNTVIHKTGSTLRGIDLTGLTNPIVKDNLLNGFNQGIYSFKNSKGAYVFGNHLDNCATSYYFEGDPGSDYQLSLSGGAVLNSATGISVQNIDDVKISGVDFKNISQYDLNIWTYKVLVVDGICNTDGTGKLRLNGNTSGTLSATVATQIGDTPGFAHSWKHNATAVTSITSSLNTWGKYAGKVVIDANNQVYMSTGTTAASIWVSLSGGTSVTPA
Physico‐chemical
properties
protein length:603 AA
molecular weight: 64951,91590 Da
isoelectric point:6,35434
aromaticity:0,09287
hydropathy:-0,20116

Domains

Domains [InterPro]
DC_0666
STR
20–602
DC_0666
IPR012334
STR
53–458
IPR012334
IPR011050
STR
60–498
IPR011050
IPR024535
ENZ
61–115
IPR024535
QDP42968.1
1 603
Architecture
STR
STR 20-602 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDP42968.1
1 603
Domain Start End Length (AA) Confidence
N-terminal 1 68 68 0,9787
Central domain 69 538 471 0,9827
C-terminal 539 603 64 0,9476
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-68
Central
69-538
C-terminal
539-603

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BmeM-Goe8
[NCBI] 		2593638 Uroviricota > Caudoviricetes > Herelleviridae > Goettingenvirus > Goettingenvirus goe8
Host Bacillus megaterium DSM 319
[NCBI] 		592022 Bacillota > Bacilli > Caryophanales > Bacillaceae > Priestia > Priestia megaterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDP42968.1 [NCBI]
Genbank nucleotide accession
MN043729.1 [NCBI]
CDS location
range 135407 -> 137218
strand +
CDS
ATGACAAACTTGTTCAGAGATAACTTATATGATAACTTTCCAGACCCTAGGGAATTAATTAAAAATGAGATAGGAGATAAAACTAGCCTACCACAATGGTTACAAGCTAGCTTACGAGAAGTAGTACAACGTCATGAGGAGTACTTGAAGCAGGTAGGGGTTAATATCAAACAGCCACCTTTTAATGCTGTAGGGGATGGCGTAGCAGATGATACAAAAGCTATTAATGACGCTCTCGCTTCCTTAAAAGATGGGGCAATATTGCTTATCCCGGGAGGGTATACTTTTAGAATATCCTCTACTGTACCAGTTAATAAACGATGTATGCTAACTGGAGGCGGAAAAATAATTAATAGTGACGGTATGAATACATCATACCACTTTGAGGTTACAGCAGATAATACGAGCTTTCACAAGTTAGTAATGGATAACCCTAAGATGCTTAAGTCTCAAACAGGTAACCGTCAAGGAGCTATTAACATTAAAGCAAATTATGTATCAGTTACAGGATGCACTTTTTATCGTATGTTACAAGGTATCTCTCAAGCGTCTTCAGGAGAGTTCGTAGGTGCGATCGTAGCCAATAACTACTTCTTAGAGCATATTGGCGCAGGAGACGGAGCTACTAATGACACTTCTAACTACGGAGAAGATCGAGGAGATGCGGTTACTCTATGGGGCGCAGGTTCAATGATTATCGGGAACTATGCACAATGTATGGCAGGACAAGATGCTAGAATCGCTTTCCATGCTGAAGGCTATGCTGTAAACATACCTACCCCTAATCCTGCAAAAGATAATAAAGACTTTATTATCGCTAATAACATTGCGGTGGGCTCATTCCGCAGACACTTTGTTTTTGAGGACCTATTTAACGGCGTTATTTCAAACAACGTATCCTACGGAGGAGCTACTTGGTGGAGTCTCTGTATTGTGCAAGCTAAAAACTGTCGATTTGATAACAACATTCTACATTTCACAAGAGAAGCTACTGACAAATCAGGAGCTAAATGGGCTCCAGTTTATGCAGCGGTAGTTATGATGAATTACTCTGAAGGGGTAACTTTATCTAATAACCAAATCTATATGGCGGATAATGCAGCAGGTAAAGCCTTCCACTCTCAAACACTGAATACTGGAGTACACACAAATACAAGGATTGTAGGAAATACGGTCATCCATAAAACAGGTTCTACTCTACGTGGTATAGACTTGACAGGGTTAACAAATCCGATTGTTAAGGATAACCTCTTAAATGGATTTAACCAAGGGATTTATAGCTTTAAGAATAGTAAAGGGGCTTATGTATTCGGTAACCACCTAGACAACTGTGCAACTAGCTACTACTTTGAAGGGGACCCGGGCAGCGATTACCAGCTATCTTTATCAGGTGGAGCCGTGTTAAACTCCGCTACAGGTATTAGTGTTCAAAATATAGACGATGTAAAGATTAGCGGAGTGGATTTCAAAAACATCTCTCAATACGATCTGAATATTTGGACATACAAAGTACTAGTTGTAGATGGAATATGTAATACAGACGGAACAGGTAAGCTACGACTGAATGGTAACACTTCAGGGACGTTATCTGCTACAGTAGCTACTCAGATCGGAGATACTCCCGGTTTTGCTCACAGTTGGAAGCATAATGCAACAGCTGTTACTAGTATAACTTCTTCTCTAAACACTTGGGGTAAATATGCTGGTAAAGTTGTAATCGATGCAAATAACCAAGTGTATATGTCTACAGGAACAACAGCAGCGAGTATCTGGGTAAGTTTATCTGGTGGAACTTCCGTAACGCCTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
227006adf298d577ff5f07a5fa68d9b0e0e39173905a8768b16dbdd141a1300b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7934
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50