Protein

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Genbank accession
AAB06219.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNTLSIEYDTVKCGDTSHGFILSAAEDGQVKTFADNDQVVVKVGDSNLKQVASLDTMVNDDGSLIASSANLAKLPAGQYSVELWQTTDTGVVVYPSNGQAIITLMPSIN
Physico‐chemical
properties
protein length:109 AA
molecular weight: 11510,71200 Da
isoelectric point:4,09891
aromaticity:0,05505
hydropathy:0,00000

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage LL-H
[NCBI] 		12348 No lineage information
Host Lactobacillus delbrueckii subsp. lactis
[NCBI] 		29397 Bacteria > Firmicutes > Bacilli > Lactobacillales > Lactobacillaceae > Lactobacillus
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAB06219.1 [NCBI]
Genbank nucleotide accession
EF455602.1 [NCBI]
CDS location
range 23844 -> 24173
strand +
CDS
ATGAACACACTTTCAATCGAATACGACACGGTCAAATGTGGAGACACTTCCCACGGTTTCATCCTGAGTGCAGCTGAAGACGGCCAAGTTAAGACCTTTGCAGACAACGACCAGGTGGTGGTCAAGGTTGGCGATTCCAATTTAAAGCAGGTGGCTTCCTTGGACACGATGGTAAACGACGACGGCTCGTTGATTGCATCATCAGCTAATTTGGCAAAACTACCAGCTGGACAGTACTCAGTCGAGTTATGGCAGACCACCGACACTGGTGTAGTGGTCTATCCGTCAAACGGGCAAGCGATTATTACCTTGATGCCATCTATTAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0383de8542b96f59cadae7f00fede77bb4d35e10afb28b81ae1566f51ae8e390
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8851
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Molecular comparison of the structural proteins encoding gene clusters of two related Lactobacillus delbrueckii bacteriophages Vasala,A., Dupont,L., Baumann,M., Ritzenthaler,P. and Alatossava,T. 1993 8497043 GenBank
Ribosome binding site consensus sequence of Lactobacillus delbrueckii subsp. lactis bacteriophage LL-H Mikkonen,M., Vuoristo,J. and Alatossava,T. 1994 7514146 GenBank
Characterization of the genome region encoding structural proteins of Lactobacillus delbrueckii subsp. lactis bacteriophage LL-H Mikkonen,M. and Alatossava,T. 1994 7828907 GenBank
A group I intron in the terminase gene of Lactobacillus delbrueckii subsp. lactis phage LL-H Mikkonen,M. and Alatossava,T. 1995 7496530 GenBank
Genetic and biochemical characterization of the Lactobacillus delbrueckii subsp. lactis bacteriophage LL-H lysin Vasala,A., Valkkila,M., Caldentey,J. and Alatossava,T. 1995 8526515 GenBank
Genes and genome of Lactobacillus phage LL-H Mikkonen,M. 1996 — GenBank
Defective site-specific integration elements are present in the genome of virulent bacteriophage LL-H of Lactobacillus delbrueckii Mikkonen,M., Dupont,L., Alatossava,T. and Ritzenthaler,P. 1996 8633887 GenBank
The early gene region completes the nucleotide sequence of Lactobacillus delbrueckii subsp. lactis phage LL-H Mikkonen,M., Raisanen,L. and Alatossava,T. 1996 8917075 GenBank