Protein

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Genbank accession
YP_008433591.2 [GenBank]
Protein name
putative adhesin
RBP type
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MLSLIPRLAPWPLPRASSEVSDLWVQYRFLGTEAIDEVTDAVATLYGTATLADGKLVTNPASPANYAAMNNIIFDANEDFNISLNVNMPFSNSRPYNTILGVYTSTAGPRAWALGRIGNDTNPSKLHFAMVSGGVKYDFYGPVLNADTDYHIEVSRTQNVLYIFVNGNLELATPFALGNDQASLPRMRTDVILAEGQTATLTHHGGGYKWGLQIFKGKGGHTSNFTPEAPVEYSRPYYTADVAQDIKLQLGMRRGTKACEASGAQLALNGTATVGKNARLSLTNVTTSYASIPVAAFGEADFTIEFMCNLSAVHSTYGNHFGHMFSSVSASEDNRWIVWVSPSGRLGFSMSLSANANDTVGTGSVEGAFKFNRDNHIVVQRKDGVIKLYLNKQEVAQMAQAAPIRGGAGVFRTQSLNGATSCAGQLWNIRIADRALYSEQVKTKPTFPQFTKEYDPTLFMQYTFSYDEAINEVTETFAALSGNAAVSNGRLSTGSSASDNMSTPATLIEPNEDFTLEVMFNCTTHNVNMPILGIVGGSNTGVSKNAWYLHYDVPAAAFRFMVYDGTGASDMVQFARPNIFNTDTHIAIARKGGVMTLFIAGQPVASTPSIKGNVPTSVQMGTTFSSTYMNGTRTNFRLVRGRALYDSAFEPPVTLPVVGRPTYTQQEAAATKAQIDLRRDSARNDANGRSVQVYSSARHVRGRILHAAATSSFYYAPCEPFGAGDFTIELDFNLTSINGTYGGALAGQWVRGNVASEDNCWLIYVGPTRLIQFAWARSAAANDFDFIASAAGVFDFSADYRLVVERIGTTLTIYLNNVQVAQGTCAIPLRTNAPHYVRSNSSANLYAFGGSVWNLRISDRAVYNGNVTRVPLFPKMPKAAEYTDQSLLNDIVVQCDMNEGNARNAKTGEVITFSGTGAAIRERLVTTLANTSRWYIPCGPFSAGDFTIEFDLNLLSSTGASSRPIFGQFRGDVGPNSWVFYTTSSGNLAFQCLGVDASSLSIDSLNGPIEKRTLTAGKEHHVVVERKAGVVTMYIDGVVIGSGAFTAQLVDMSAYPYITNLYDLSTAKYCASEIGNVRIAKRALYNGVITKARLPLVPNQKPSLTANIGSAIGTLSGACQNLYYGGVQSSLGAFSHTLFRDIRDPQNVKTVRLVALALDRTYTVLAWREVDMPPTADMPQFTNSLKIGNAAPLLISNSSGASVANGVTGRYWSGNPFGPLTHGTAIPFEFV
Physico‐chemical
properties
protein length:1231 AA
molecular weight: 132947,13720 Da
isoelectric point:7,26990
aromaticity:0,10154
hydropathy:-0,08798

Domains

Domains [InterPro]
IPR013320
STR
21–172
IPR013320 G3DSA:2.60.120.200 IPR013320 G3DSA:2.60.120.200 G3DSA:2.60.120.200
IPR013320
STR
280–444
IPR013320 G3DSA:2.60.120.200 IPR013320 IPR013320
PF13385
LEC
286–441
PF13385 PF13385 PF13385
DC_2085
STR
625–859
DC_2085
YP_008433591.2
1 1231
Architecture
STR
STR
STR
STR
STR 21-172 | STR 250-444 | STR 480-870 | STR 879-1091 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008433591.2
1 1231
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,9632
Central domain 21 334 315 0,7923
C-terminal 335 1231 896 0,1793
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-334
C-terminal
335-1231

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaBG
[NCBI] 		1335230 Uroviricota > Caudoviricetes > Baikalvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008433591.2 [NCBI]
Genbank nucleotide accession
NC_022096 [NCBI]
CDS location
range 227065 -> 230760
strand +
CDS
ATGCTGAGTCTGATTCCGAGACTAGCACCTTGGCCTTTGCCGAGGGCATCCTCAGAGGTAAGTGACCTTTGGGTGCAATATCGATTTCTTGGCACTGAAGCCATTGATGAAGTTACGGATGCTGTAGCCACGCTCTACGGAACCGCCACTTTGGCTGACGGTAAACTCGTGACTAACCCAGCGAGTCCTGCCAACTACGCGGCCATGAACAACATCATCTTCGACGCCAACGAAGATTTCAACATAAGCCTGAACGTGAATATGCCGTTCAGCAACAGCCGTCCATACAACACTATTCTTGGTGTGTACACTTCGACCGCAGGTCCACGTGCTTGGGCTCTGGGTCGCATCGGTAACGACACTAACCCGTCGAAGCTCCACTTCGCCATGGTCTCAGGAGGTGTCAAATACGACTTCTACGGTCCCGTGCTGAACGCCGACACTGATTACCACATCGAAGTGTCGCGCACTCAGAACGTGCTGTACATCTTCGTAAACGGCAACTTGGAGCTGGCTACGCCTTTTGCCTTGGGCAACGATCAGGCTTCTTTGCCCAGGATGCGTACCGACGTTATCCTCGCCGAGGGCCAGACGGCGACGCTCACGCACCACGGCGGCGGCTATAAGTGGGGCCTTCAGATTTTCAAAGGTAAGGGCGGTCATACGTCCAACTTTACGCCCGAAGCACCTGTCGAATACTCGCGCCCGTACTACACGGCAGACGTAGCACAAGACATCAAGCTGCAACTTGGCATGCGCCGCGGTACTAAGGCGTGCGAAGCCTCTGGTGCCCAGTTAGCCTTGAACGGCACAGCGACCGTAGGTAAGAACGCTCGCTTATCTTTGACGAACGTAACGACCTCTTACGCGAGTATCCCGGTTGCCGCATTTGGAGAAGCCGACTTTACCATTGAGTTCATGTGTAACCTGAGCGCTGTGCATTCGACATATGGTAACCATTTCGGGCACATGTTTAGCTCGGTGAGCGCCAGCGAGGATAACCGCTGGATCGTTTGGGTGTCGCCTTCGGGTCGTCTGGGCTTTTCGATGAGCTTATCCGCGAACGCGAATGACACTGTAGGCACAGGTTCCGTAGAGGGTGCCTTCAAGTTCAACCGTGACAATCACATTGTTGTCCAGCGTAAGGATGGCGTCATCAAGCTCTACTTGAACAAACAAGAAGTGGCACAAATGGCACAAGCTGCACCCATCAGGGGCGGCGCTGGTGTGTTCCGCACACAGTCGCTCAACGGTGCAACCTCGTGTGCCGGCCAGCTGTGGAACATTCGGATTGCTGACCGGGCACTCTACTCGGAACAGGTCAAGACCAAGCCAACATTCCCGCAGTTCACCAAAGAATACGACCCCACGCTGTTCATGCAGTACACGTTCAGCTACGACGAAGCGATCAACGAAGTTACGGAGACGTTCGCGGCTCTCTCCGGCAACGCGGCCGTATCAAATGGCAGGTTGTCCACTGGGTCTTCGGCGAGCGACAACATGTCTACGCCTGCCACGTTGATCGAACCGAACGAAGACTTCACGTTGGAGGTGATGTTCAACTGCACCACGCATAACGTGAACATGCCGATTCTCGGTATCGTGGGTGGGAGTAACACAGGCGTATCCAAGAACGCATGGTACTTGCACTACGACGTTCCTGCTGCGGCATTTCGCTTCATGGTGTATGACGGTACTGGCGCCAGTGACATGGTGCAGTTCGCACGCCCCAACATCTTCAATACTGACACGCACATCGCAATAGCCCGTAAAGGCGGTGTGATGACGCTGTTCATCGCGGGTCAGCCAGTTGCCAGCACACCAAGCATCAAAGGTAACGTGCCGACTTCTGTGCAGATGGGCACCACGTTCTCCTCAACGTACATGAACGGGACGCGAACAAACTTCCGTCTGGTGCGCGGACGCGCGCTGTACGATTCCGCGTTCGAGCCTCCGGTAACGCTGCCTGTTGTAGGTCGTCCGACGTACACCCAGCAAGAAGCCGCTGCGACCAAAGCGCAGATCGATCTGCGCCGAGACAGTGCGCGAAACGATGCCAACGGACGCTCCGTTCAAGTTTATAGCTCGGCACGTCACGTTAGGGGCCGCATTCTTCATGCTGCCGCAACGTCGTCGTTCTACTACGCACCATGCGAGCCATTCGGAGCTGGTGATTTCACCATAGAGCTGGACTTTAACCTGACATCGATCAACGGCACGTACGGAGGTGCACTGGCCGGACAGTGGGTGCGAGGCAACGTAGCCTCAGAAGATAACTGCTGGCTGATCTATGTAGGACCAACCAGACTCATCCAGTTCGCCTGGGCCCGCAGTGCCGCAGCGAACGATTTCGACTTCATCGCGTCTGCGGCAGGCGTGTTTGATTTCAGCGCTGACTACCGTTTGGTTGTGGAGCGTATCGGGACCACGCTGACGATCTACCTGAACAATGTCCAGGTTGCACAGGGTACGTGCGCGATCCCGTTGAGAACAAACGCTCCCCATTACGTGCGCAGTAACAGCTCGGCAAACCTATATGCGTTCGGCGGTTCTGTGTGGAATCTGCGCATTTCGGATCGTGCAGTGTACAACGGCAATGTAACGCGAGTCCCACTGTTCCCGAAAATGCCGAAAGCCGCCGAGTACACGGACCAGAGTCTGTTGAACGACATTGTTGTGCAGTGCGATATGAACGAAGGGAACGCACGCAACGCCAAGACAGGTGAAGTCATTACGTTCTCAGGTACGGGTGCGGCTATTCGTGAGCGCTTGGTGACGACACTTGCCAACACTTCGCGCTGGTATATCCCGTGCGGTCCGTTCAGTGCTGGCGATTTCACAATCGAGTTCGATTTGAACCTGCTGAGTTCCACTGGGGCTTCGTCTCGTCCGATCTTCGGTCAGTTCAGAGGTGACGTAGGACCAAACTCGTGGGTTTTCTACACCACGTCATCTGGTAACTTGGCGTTCCAGTGTTTGGGTGTAGATGCGTCATCGCTGAGTATCGACTCTCTCAATGGGCCTATCGAGAAGCGCACGCTGACAGCAGGTAAAGAACATCACGTGGTTGTCGAGCGCAAGGCTGGCGTTGTGACCATGTACATCGATGGTGTTGTCATCGGCAGCGGAGCTTTCACTGCACAGCTTGTGGACATGTCGGCGTATCCGTACATCACGAACCTGTACGATCTGTCCACGGCGAAGTATTGTGCCAGTGAGATTGGCAACGTGCGTATTGCCAAGCGTGCCCTGTACAATGGTGTGATCACCAAAGCAAGGCTGCCGCTCGTCCCGAACCAGAAGCCTTCGTTGACTGCGAACATCGGTTCGGCGATTGGTACTCTGTCTGGTGCGTGCCAGAACTTGTATTACGGTGGCGTGCAAAGCTCGTTGGGTGCATTCAGCCATACGCTGTTCCGTGACATCCGCGATCCGCAGAACGTCAAGACTGTTCGCCTTGTTGCGCTCGCTCTCGACAGGACGTACACCGTGCTGGCGTGGCGAGAAGTGGATATGCCGCCGACCGCGGATATGCCGCAGTTCACCAACTCGTTGAAGATCGGGAACGCCGCACCTCTGCTGATCTCCAATTCGTCCGGCGCTAGTGTTGCAAATGGCGTCACGGGGCGGTATTGGTCTGGCAACCCGTTTGGTCCGTTGACACACGGAACTGCCATTCCATTCGAGTTTGTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
fac419fc98765a9944b35d90f3831733534da0395f28dc30229ac2bebea3f1a0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2747
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50